Publications and communications of Colette Duez

Vanden Broeck, A., Sauvage, E., Joris, B., & Duez, C. (05 March 2019). Characterization of the Bacillus subtilis Penicillin-Binding Protein PBP4*. Advances in Microbiology, 9 (3). doi:10.4236/aim.2019.93013

Vanden Broeck, A., Van Der Heiden, E., Sauvage, E., Dauvin, M., Joris, B., & Duez, C. (2015). A lysine cluster in domain II of Bacillus subtilis PBP4a plays a role in the membrane attachment of this C1-PBP. PLoS ONE. doi:10.1371/journal.pone.0140082

Vanden Broeck, A., Dauvin, M., Sauvage, E., & Duez, C. (08 June 2015). A lysine cluster in domain II of Bacillus subtilis PBP4a plays a role in the membrane attachment of this C1 PBP [Poster presentation]. IAP annual meeting iPRos project, Liège, Belgium.

Nemmara, V. V., Adediran, S. A., Dave, K., Duez, C., & Pratt, R. F. (05 April 2013). Dual substrate specificity of Bacillus subtilis PBP4a. Biochemistry, 52, 2627-2637. doi:10.1021/bi400211q

Dzhekieva, L., Adediran, S. A., Herman, R., Kerff, F., Duez, C., Charlier, P., Sauvage, E., & Pratt, R. F. (2013). Inhibition of dd-Peptidases by a Specific Trifluoroketone: Crystal Structure of a Complex with the Actinomadura R39 dd-Peptidase. Biochemistry. doi:10.1021/bi400048s

Nemmara, V. V., Dzhekieva, L., Subarno Sakar, K., Adediran, S. A., Duez, C., Nicholas, R. A., & Pratt, R. F. (27 October 2011). Substrate Specificity of Low-Molecular Mass Bacterial DD-Peptidases. Biochemistry, 50, 10091-10101. doi:10.1021/bi201326a

Van der Heiden, E., Jourdan, E., Delmarcelle, M., & Duez, C. (20 June 2011). The attachment of Bacillus amyloliquefaciens FZB42 to tomato roots is impaired in a mutant devoid of GalM and PBP4a [Poster presentation]. 6th International Conference on Gram-Positive Microorganisms 16th International conference onBacilli, Montecatini Terme, Italy.

Tytgat, I., Vandevuer, S., Ortmans, I., Sirockin, F., Colacino, E., Van Bambeke, F., Duez, C., Poupaert, J. H., Tulkens, P. M., Dejaegere, A., & Prévost, M. (16 September 2009). Structure-based design of benzoxazoles as new inhibitors for D-alanyl-D-alanine ligase. QSAR and Combinatorial Science, 28 (11-12), 1394-1404. doi:10.1002/qsar.200910054

Sonan, G. K., Receveur-Brechot, V., Duez, C., Aghajari, N., Czjzek, M., Haser, R., & Gerday, C. (15 October 2007). The linker region plays a key role in the adaptation to cold of the cellulase from an Antarctic bacterium. Biochemical Journal, 407 (Part 2), 293-302. doi:10.1042/BJ20070640

Sauvage, E., Duez, C., Herman, R., Kerff, F., Petrella, S., Anderson, J. W., Adediran, S. A., Pratt, R. F., Frère, J.-M., & Charlier, P. (10 August 2007). Crystal structure of the Bacillus subtilis penicillin-binding protein 4a, and its complex with a peptidoglycan mimetic peptide. Journal of Molecular Biology, 371 (2), 528-539. doi:10.1016/j.jmb.2007.05.071

Danyi, S., Degand, G., Duez, C., Granier, B., Maghuin-Rogister, G., & Scippo, M.-L. (2007). Solubilisation and binding characteristics of a recombinant beta(2)-adrenergic receptor expressed in the membrane of Escherichia coli for the multianalyte detection of beta-agonists and antagonists residues in food-producing animals. Analytica Chimica Acta, 589 (2), 159-165. doi:10.1016/j.aca.2007.02.057

Moreira, P. R., Duez, C., Dehareng, D., Antunes, A., Almeida-Vara, E., Frère, J.-M., Malcata, F. X., & Duarte, J. C. (10 September 2005). Molecular characterisation of a versatile peroxidase from a Bjerkandera strain. Journal of Biotechnology, 118 (4), 339-352. doi:10.1016/j.jbiotec.2005.05.014

Sauvage, E., Herman, R., Petrella, S., Duez, C., Bouillenne, F., Frère, J.-M., & Charlier, P. (2005). Crystal structure of the Actinomadura R39 DD-peptidase reveals new domains in penicillin-binding proteins. Journal of Biological Chemistry, 280 (35), 31249-56. doi:10.1074/jbc.M503271200

Duez, C., Hallut, S., Rhazi, N., Amoroso, A. M., Bouillenne, F., & Coyette, J. (July 2004). The ponA gene of Enterococcus faecalis JH2-2 codes for a low-affinity class a penicillin-binding protein. Journal of Bacteriology, 186 (13), 4412-4416. doi:10.1128/JB.186.13.4412-4416.2004

Duez, C., Zorzi, W., Sapunaric, F., Amoroso, A. M., Thamm, I., & Coyette, J. (September 2001). The Penicillin Resistance of Enterococcus Faecalis Jh2-2r Results from an Overproduction of the Low-Affinity Penicillin-Binding Protein Pbp4 and Does Not Involve a Psr-Like Gene. Microbiology, 147 (Pt 9), 2561-9. doi:10.1099/00221287-147-9-2561

Cheggour, A., Fanuel, L., Duez, C., Joris, B., Bouillenne, F., Devreese, B., Van Driessche, G., Van Beeumen, J., Frère, J.-M., & Goffin, C. (November 2000). The Dppa Gene of Bacillus Subtilis Encodes a New D-Aminopeptidase. Molecular Microbiology, 38 (3), 504-13. doi:10.1046/j.1365-2958.2000.02117.x

Swaren, P., Maveyraud, L., Raquet, X., Cabantous, S., Duez, C., Pédelacq, J.-D., Maryotte-Boyer, S., Mourey, L., Labia, R., Nicolas-Chanoine, M.-H., Nordmann, P., Frère, J.-M., & Samama, J.-P. (09 October 1998). X-ray analysis of the NMC-A beta-lactamase at 1.64-A resolution, a class A carbapenemase with broad substrate specificity. Journal of Biological Chemistry, 273 (41), 26714-26721. doi:10.1074/jbc.273.41.26714

Duez, C., Thamm, I., Sapunaric, F., Coyette, J., & Ghuysen, J.-M. (1998). The Division and Cell Wall Gene Cluster of Enterococcus Hirae S185. DNA Sequence: the Journal of DNA Sequencing and Mapping, 9 (3), 149-161. doi:10.3109/10425179809072190

Zhao, G., Duez, C., Forceille, C., Rhazi, N., Klein, D., Ghuysen, J.-M., Frère, J.-M., & Lepage, S. (15 October 1997). Site-Directed Mutagenesis of the Actinomadura R39 DD-Peptidase. Biochemical Journal, 327 (2), 377-381. doi:10.1042/bj3270377

Ledent, P., Duez, C., Vanhove, M., Lejeune, A., Fonze, E., Charlier, P., Rhazi-Filali, F., Thamm, I., Guillaume, G., Samyn, B., Devreese, B., Van Beeumen, J., Lamotte-Brasseur, J., & Frère, J.-M. (1997). Unexpected Influence of a C-Terminal-Fused His-Tag on the Processing of an Enzyme and on the Kinetic and Folding Parameters. FEBS Letters, 413 (2), 194-196. doi:10.1016/S0014-5793(97)00908-3

Chavagnat, F., Duez, C., Guinand, M., Potin, P., Barbeyron, T., Henrissat, B., Wallach, J., & Ghuysen, J.-M. (1996). Cloning, sequencing and overexpression in Escherichia coli of the alginate lyase-encoding aly gene of Pseudomonas alginovora: identification of three classes of alginate lyases. Biochemical Journal, 319 (Pt 2), 575-583. doi:10.1042/bj3190575

Ghuysen, J.-M., Charlier, P., Coyette, J., Duez, C., Fonze, E., Fraipont, C., Joris, B., Nguyen-Distèche, M., & Goffin, C. (1996). Penicillin and Beyond: Evolution, Protein Fold, Multimodular Polypeptides, and Multiprotein Complexes. Microbial Drug Resistance: Mechanism, Epidemiology, and Disease, 2 (2, Summer), 163-175. doi:10.1089/mdr.1996.2.163

Malissard, M., Chavagnat, F., Duez, C., Vacheron, M.-J., Guinand, M., Michel, G., & Ghuysen, J.-M. (15 February 1995). Overproduction and properties of the mannuronate alginate lyase AlxMB. FEMS Microbiology Letters, 126 (2), 105-111. doi:10.1016/0378-1097(94)00536-Z

Carfi, A., Pares, S., Duée, E., Galleni, M., Duez, C., Frère, J.-M., & Dideberg, O. (1995). The 3-D structure of a zinc metallo-beta-lactamase from Bacillus cereus reveals a new type of protein fold. EMBO Journal, 14 (20), 4914-4921. doi:10.1002/j.1460-2075.1995.tb00174.x

Duez, C., Piron-Fraipont, C., Joris, B., Dusart, J., Urdea, M.-S., Martial, J., Frère, J.-M., & Ghuysen, J.-M. (15 September 1994). Erratum for : primary structure of the streptomyces R61 extracellular DD-peptidase. 1. Cloning into Streptomyces lividans and nucleotide sequence of the gene. European Journal of Biochemistry, 224 (3), 1079. doi:10.1111/j.1432-1033.1994.01079.x

Moreau, A., Duez, C., & Dusart, J. (August 1994). Improvement of Gc-Rich Template Amplification by Inverse Pcr. BioTechniques, 17 (2), 232-4.

Granier, B., Jamin, M., Adam, M., Galleni, M., Lakaye, B., Zorzi, W., Grandchamps, J., Wilkin, J.-M., Fraipont, C., Joris, B., Duez, C., Nguyen-Distèche, M., Coyette, J., Leyh-Bouille, M., Dusart, J., Christians, L., Frère, J.-M., & Ghuysen, J.-M. (1994). Serine-Type D-Ala-D-Ala Peptidases and Penicillin-Binding Proteins. Methods in Enzymology, 244, 249-266. doi:10.1016/0076-6879(94)44021-2

Timm, J., Perilli, M. G., Duez, C., Trias, J., Orefici, G., Fattorini, L., Amicosante, G., Oratore, A., Joris, B., & Frère, J.-M. (1994). Transcription and expression analysis, using lacZ and phoA gene fusions, of Mycobacterium fortuitum beta-lactamase genes cloned from a natural isolate and a high-level beta-lactamase producer. Molecular Microbiology, 12 (3), 491-504. doi:10.1111/j.1365-2958.1994.tb01037.x

Hourdou, M.-L., Guinand, M., Vacheron, M.-J., Denoroy, L., Duez, C., Englebert, S., Joris, B., Weber, G., Ghuysen, J.-M., & Michel, G. (01 June 1993). Characterization of the Sporulation-Related Gamma-D-Glutamyl-(L)Meso-Diaminopimelic-Acid-Hydrolysing Peptidase I of Bacillus Sphaericus NCTC 9602 as a Member of the Metallo(Zinc) Carboxypeptidase A Family. Modular Design of the Protein. Biochemical Journal, 292 (Pt 2), 563-570. doi:10.1042/bj2920563

Wilkin, J.-M., Jamin, M., Damblon, C., Zhao, G.-H., Joris, B., Duez, C., & Frère, J.-M. (15 April 1993). The Mechanism of Action of DD-Peptidases: The Role of Tyrosine-159 in the Streptomyces R61 DD-Peptidase. Biochemical Journal, 291 (Part 2), 537-544. doi:10.1042/bj2910537

Malissard, M., Duez, C., Guinand, M., Vacheron, M.-J., Michel, G., Marty, N., Joris, B., Thamm, I., & Ghuysen, J.-M. (1993). Sequence of a gene encoding a (poly ManA) alginate lyase active on Pseudomonas aeruginosa alginate. FEMS Microbiology Letters, 110 (1), 101-106. doi:10.1111/j.1574-6968.1993.tb06302.x

Hadonou, A. M., Wilkin, J.-M., Varetto, L., Joris, B., Lamotte-Brasseur, J., Klein, D., Duez, C., Ghuysen, J.-M., & Frère, J.-M. (01 July 1992). Site-Directed Mutagenesis of the Streptomyces R61 Dd-Peptidase. Catalytic Function of the Conserved Residues around the Active Site and a Comparison with Class-a and Class-C Beta-Lactamases. European Journal of Biochemistry, 207 (1), 97-102. doi:10.1111/j.1432-1033.1992.tb17025.x

Granier, B., Duez, C., Englebert, S., Dusart, J., Dideberg, O., Van Beeumen, J., Frère, J.-M., Ghuysen, J.-M., & Lepage, S. (15 March 1992). Primary and Predicted Secondary Structures of the Actinomadura R39 Extracellular DD-Peptidase, a Penicillin-Binding Protein (PBP) Related to the Escherichia coli PBP4. Biochemical Journal, 282 (Pt 3), 781-788. doi:10.1042/bj2820781

Hourdou, M.-L., Duez, C., Joris, B., Vacheron, M.-J., Guinand, M., Michel, G., & Ghuysen, J.-M. (01 March 1992). Cloning and nucleotide sequence of the gene encoding the γ-D-glutamyl-L-diamino acid endopeptidase II of Bacillus sphaericus. FEMS Microbiology Letters, 91 (2), 165-170. doi:10.1016/0378-1097(92)90678-H

Granier, B., Duez, C., Lepage, S., Englebert, S., Dusart, J., Dideberg, O., Van Baumeen, J., Frère, J.-M., & Ghuysen, J.-M. (1992). Correction: Primary and predicted secondary structure of the actinomadura R39 extracellular DD-peptidase, a penicillin-binding protein (PBP) related to the escherichia coli PBP4 (Biochemical Journal(1992)282(786)). Biochemical Journal, 282 (Part 3), 981-982. doi:10.1042/bj2860981c

Palomeque-Messia, P., Englebert, S., Leyh-Bouille, M., Nguyen-Distèche, M., Duez, C., Houba, S., Dideberg, O., Van Beeumen, J., & Ghuysen, J.-M. (01 October 1991). Amino Acid Sequence of the Penicillin-Binding Protein/DD-Peptidase of Streptomyces K15. Predicted Secondary Structures of the Low Mr Penicillin-Binding Proteins of Class A. Biochemical Journal, 279 (Pt 1), 223-230. doi:10.1042/bj2790223

Duez, C., Lakaye, B., Houba, S., Dusart, J., & Ghuysen, J.-M. (01 September 1990). Cloning, Nucleotide Sequence and Amplified Expression of the Gene Encoding the Extracellular Metallo (Zn) Dd-Peptidase of Streptomyces Albus G. FEMS Microbiology Letters, 71 (1-2), 215-219. doi:10.1016/0378-1097(90)90059-Y

Houba, S., Willem, S., Duez, C., Molitor, C., Dusart, J., Frère, J.-M., & Ghuysen, J.-M. (December 1989). Nucleotide sequence of the gene encoding the active-site serine β-lactamase from Actinomadura R39. FEMS Microbiology Letters, 65 (3), 241-246. doi:10.1111/j.1574-6968.1989.tb03667.x

Fraipont, C., Duez, C., Matagne, A., Molitor, C., Dusart, J., Frère, J.-M., & Ghuysen, J.-M. (1989). Cloning and amplified expression in Streptomyces lividans of the gene encoding the extracellular β-lactamase of Actinomadura R39. Biochemical Journal, 262 (3), 849-854. doi:10.1042/bj2620849

Duez, C., Fraipont, C., Joris, B., Dusart, J., Urdea, M. S., Martial, J., Frère, J.-M., & Ghuysen, J.-M. (1987). Primary structure of the Streptomyces R61 extracellular DD-peptidase. 1. Cloning into Streptomyces lividans and nucleotide sequence of the gene. European Journal of Biochemistry, 162, 509-518. doi:10.1111/j.1432-1033.1987.tb10669.x

Kelly, J. A., Dideberg, O., Charlier, P., Wery, J.-P., Libert, M., Moews, P., Knox, J., Duez, C., Fraipont, C., Joris, B., Dusart, J., Frère, J.-M., & Ghuysen, J.-M. (21 March 1986). On the origin of bacterial resistance to penicillin: comparison of a beta-lactamase and a penicillin target. Science, 231, 1429-1431. doi:10.1126/science.3082007

Dehottay, P., Dusart, J., Duez, C., Lenzini, M. V., Martial, J., Frère, J.-M., Ghuysen, J.-M., & Kieser, T. (1986). Cloning and amplified expression in Streptomyces lividans of a gene encoding extracellular β-lactamase from Streptomyces albus G. Gene, 42 (1), 31-36. doi:10.1016/0378-1119(86)90147-2

Ghuysen, J.-M., Frère, J.-M., Leyh-Bouille, M., Nguyen-Distèche, M., Coyette, J., Dusart, J., Joris, B., Duez, C., Dideberg, O., Charlier, P., Dive, G., & Lamotte-Brasseur, J. (1984). Bacterial cell wall, DD-peptidase and β-lactam antibiotics. Scandinavian Journal of Infectious Diseases, 42, 17-37.

Duez, C., Frère, J.-M., Ghuysen, J.-M., Van Beeumen, J., Delcambe, L., & Dierickx, L. (1982). Purification and properties of the exocellular β-lactamase of Actinomadura strain R39. Biochimica et Biophysica Acta - General Subjects, 700, 24-32. doi:10.1016/0167-4838(82)90287-4

Duez, C., Frère, J.-M., Ghuysen, J.-M., Van Beeumen, J., & Vandekerckhove, J. (1981). Studies on the primary structures of the exocellular D-Alanyl-D-Alanine peptidases of Streptomyces strain R61 and Actinomadura strain R39. Biochimica et Biophysica Acta - General Subjects, 671, 109-116. doi:10.1016/0005-2795(81)90123-9

Duez, C., Frère, J.-M., Klein, D., Noël, M., Ghuysen, J.-M., Delcambe, L., & Dierickx, L. (1981). The exocellular β-lactamase of Streptomyces albus G. Purification, properties and comparison with the exocellular DD-carboxypeptidase. Biochemical Journal, 193 (1), 75-82. doi:10.1042/bj1930075

Duez, C., Joris, B., Frère, J.-M., Ghuysen, J.-M., & Van Beeumen, J. (1981). The penicillin-binding site in the exocellular DD-carboxypeptidase-transpeptidase of Actinomadura R39. Biochemical Journal, 193, 83-86. doi:10.1042/bj1930083

Ghuysen, J.-M., Frère, J.-M., Leyh-Bouille, M., Coyette, J., Duez, C., Joris, B., Dusart, J., Nguyen-Distèche, M., DideberG, O., Charlier, P., Knox, J. R., Kelly, J. A., Moews, P. C., & DeLucia, M. L. (1981). Mechanistic properties and functioning of DD-carboxypeptidase. In S. Mitsuhashi (Ed.), β-Lactam Antbiotics (pp. 185-202). Tokyo, Japan: Japan Scientific Society Press, Springer.

Kelly, J., Frère, J.-M., Duez, C., & Ghuysen, J.-M. (1981). Interactions between non-classical β-lactam compounds and the β-lactamases of Actinomadura R39 and Streptomyces albus G. Biochemical Journal, 199, 137-143. doi:10.1042/bj1990137

Charlier, P., Coyette, J., Dideberg, O., Duez, C., Dusart, J., Frère, J.-M., Ghuysen, J.-M., Joris, B., Leyh-Bouille, M., & Nguyen-Distèche, M. (1980). On the Active Centers of Serine and Zn II DD-carboxyppetidases. In G. I. Gregory (Ed.), Recent advances in the Chemistry of beta-lactam antibiotics (pp. 184-202). London, United Kingdom: The Royal Society of Chemistry.

Frère, J.-M., Duez, C., Dusart, J., Coyette, J., Leyh-Bouille, M., Ghuysen, J.-M., Dideberg, O., & Knox, J. (1980). Mode of action of B-lactam antibiotics at the molecular level. In M. Sandler, Enzyme inhibitors as drugs (pp. 183-207). Macmillan.

Duez, C., Frère, J.-M., Geurts, F., Ghuysen, J.-M., Dierickx, L., & Delcambe, L. (1978). The exocellular DD-carboxypeptidase-endopeptidase from Streptomyces albus Gl. Purification and chemical properties. Biochemical Journal, 175 (3), 793-800.

Frère, J.-M., Duez, C., Ghuysen, J.-M., & Vandekerkhove, J. (November 1976). Occurrence of a serine residue in the penicillin-binding site of the exocellular DD-carboxy-peptidase-transpeptidase from streptomyces R61. FEBS Letters, 70 (1), 257-260. doi:10.1016/0014-5793(76)80770-3

Fuad, N., Frère, J.-M., Ghuysen, J.-M., Duez, C., & Iwatsubo, M. (1976). Mode of interaction between β-lactam antibiotics and the exocellular DD-carboxypeptidase--transpeptidase from Streptomyces R39. Biochemical Journal, 155 (3), 623-629. doi:10.1042/bj1550623

Johnson, K., Duez, C., Frère, J.-M., & Ghuysen, J.-M. (1975). Beta-lactamases (Actinomycetes species). Methods in Enzymology, XLIII, 687-698. doi:10.1016/0076-6879(75)43134-2

Ghuysen, J.-M., Leyh-Bouille, M., Frère, J.-M., Dusart, J., Coyette, J., Nguyen-Distèche, M., & Duez, C. (1974). Comment la Pénicilline tue les bactéries. Annales de Microbiologie, 125 B (2), 209-210.

Ghuysen, J.-M., Leyh-Bouille, M., Campbell, J. N., Frère, J.-M., Duez, C., Nieto, M., & Perkins, H. R. (1973). Structure of the wall peptidoglycan of streptomyces R39 and the specificity profile of its exocellular DD-carboxypeptidase-transpeptidase for peptide acceptors. Biochemistry, 12 (7), 1243-1251. doi:10.1021/bi00731a001