Allium cepa L.; oignon; marqueur génétique; diversité génétique comme ressource; oinions; genetics markers; genetic diversity as resource
Abstract :
[fr] Cette étude synthétise les principaux résultats sur la biologie de l'oignon, les ressources phytogénétiques, la position taxonomique ainsi que les marqueurs morphologiques, biochimiques et moléculaires pour l'analyse de la diversité génétique de l'oignon, avec une attention particulière pour l'Afrique. Plante monocotylédone, allogame, entomophile, avec une cycle cultural annuel pour la production des bulbes, bisannuel pour celles des graines, l'oignon est l'un des légumes les plus importants au monde en raison de son utilisation en alimentation et en médecine. [en] This study explores important information on biology, genetic resources, taxonomy, as well as morphological, biochemical and molecular markers in order to provide a better understanding of the genetic diversity of the onion (Allium cepa L.). The study has a particular focus on the plant as grown in Africa. The onion is a monocotyledonous, allogamous, and entomophilous plant, with a one-year production cycle for bulb production, and a two-year production cycle for seeds. The onion is one of the most significant vegetables in the world because of its use as both a food and a médicine.
Disciplines :
Agriculture & agronomy
Author, co-author :
Rabiou, Abdou; Université de Liège - ULiège > Agronomie, Bio-ingénierie et Chimie (AgroBioChem) > Phytotechnie tropicale et Horticulture
Bakasso, Yacoubou; Université Abdou Moumouni de Niamey, Faculté des Sciences, Niamey, Niger > Biologie
Abdou, R., Taxonomie locale et analyse des critères des paysans pour caractériser les différents écotypes d’oignon (Allium cepa L.) du Niger (2014) Cah. Agric, 23, pp. 166-176
Abdou, R., Variabilité morphologique et agronomique des écotypes d’oignon (Allium cepa L.) identifiés par les producteurs du Niger (2015) Tropicultura, 33, pp. 1-14
Baldwin, S., Development of robust genomic simple sequence repeat markers for estimation of genetic diversity within and among bulb onion (Allium cepa L.) populations (2012) Mol. Breeding, 30, pp. 1401-1411
Berninger, E., Contribution à l’étude de la stérilité mâle de l’oignon (Allium cepa L.) (1965) Ann. Amelior. Plantes, 15, pp. 183-199
Boukary, H., Interactions entre la variabilité des écotypes de l’oignon (Allium cepa L.) et les facteurs agro-climatiques au Niger (2012) Tropicultura, 30 (4), pp. 209-215
Boulineau, F., L’oignon (2006) Histoire Et amélioration De Cinquante Plantes cultivées, pp. 481-493. , Doré C. & Varoquaux F., éds, Paris : INRA
Craig, W.J., Health-promoting properties of common herbs (1999) Am. J. Clin. Nutr, 70 (3), pp. 491-499
Cramer, C.S., Havey, M.J., Morphological, biochemical, and molecular markers in onion (1999) Hortic. Sci, 34, pp. 589-593
Cryder, C.M., Corgan, J.N., Urquhart, N.S., Clason, D., Isozyme analysis of progeny derived from (Allium fistulosum × Allium cepa) × Allium cepa (1991) Theor. Appl. Genet, 82, pp. 337-345
Currah, L., Onions in the tropics: Cultivars and country reports (2002) Allium Crop Science: Recent Advances, pp. 379-408. , Rabinowitch H.D. & Currah L., eds, Wallingford, UK
New York, USA: CABI Publishing
Davis, E.W., Marker genes to facilitate roguing onion-seed fields (1966) Seed World, 87, pp. 4-6
Davis, G.N., El-Shafie, M.W., Inheritance of bulb color in the onion (Allium cepa L.) (1967) Hilgardia, 38, pp. 607-622
De Lannoy, G., Oignon Allium cepa L (2001) Agriculture En Afrique Tropicale, pp. 518-526. , Raemaekers R.H., ed, Bruxelles : DGCI
(2013) Base De données Statistiques Agricoles FAO, , http://faostat3.fao.org/browse/rankings/countries_by_commodity/F, FAOSTAT, 12/05/2015
Fischer, D., Bachmann, K., Onion microsatellites for germplasm analysis and their use in assessing intra- and interspecific relatedness within the subgenus Rhizirideum (2000) Theor. Appl. Genet, 101, pp. 153-164
Fossen, T., Characteristic anthocyanin pattern from onions and other Allium spp (1996) J. Food Sci, 61, pp. 703-706
Foury, C., Schweisguth, B., L’oignon (1992) Amélioration Des espèces végétales cultivées, pp. 406-419. , Gallais A. & Bannerot H., éds, Paris : INRA
Friesen, N., Fritsch, R.M., Blattner, F.R., Phylogeny and new intrageneric classification of Allium L. (Alliaceae) based on nuclear ribosomal DNA ITS sequences (2006) Aliso, 22, pp. 372-395
Fritsch, R.M., Friesen, N., Evolution, domestication and taxonomy (2002) Allium Crop Science: Recent Advances, pp. 5-30. , Rabinowitch H.D. & Currah L., eds., Wallingford, UK
New York, USA: CABI Publishing
Grandval, F., Quelques définitions clés pour aborder ce dossier « semences » (2011) Grain Sel, 52-53, pp. 39-40
Gurushidze, M., Phylogenetic relationships of wild and cultivated species of Allium section Cepa inferred by nuclear rDNA ITS sequence analysis (2007) Plant Syst. Evol, 269, pp. 259-269
Hanelt, P., Taxonomy evolution and history (1990) Onions and Allied Crops, pp. 1-26. , Rabinowitch H.D. & Brewster J.L., eds., Boca Raton, FL, USA: CRC Press Inc
Harlan, J.R., De Wet, J., The origin and domestication of Sorghum bicolor (1971) Econ. Bot, 25, pp. 128-135
Helm, J., Die zu Würz-und Speisezwecken kultivierten Arten der Gattung Allium L (1956) Kulturpflanze, 4, pp. 130-180
(2004) Rapport d’activité, Collecte Et épuration Des Cultivars Locaux d’oignon. Rapport d’activité De La Campagne 2002-2003, , INRAN, Niamey : PPEAP & INRAN
(2001) Descriptors For, , IPGRI, ECP/GR, AVRDC, Roma: International Plant Genetic Resources Institute
Roma: European Cooperative Programme for Crop Genetic Resources Networks
Tainan, Taiwan: Asian Vegetable Research and Development Center
Jones, H.A., Clarke, A.E., Inheritance of male sterility in the onion and the production of hybrid seed (1943) Proc. Am. Soc. Hortic. Sci, 43, pp. 189-194
Jones, H.A., Clarke, A.E., Stevenson, F.J., Studies in the genetics of the onion (Allium cepa L.) (1944) Proc. Am. Soc. Hortic. Sci, 44, pp. 479-484
Jones, H.A., Mann, L.K., (1963) Onions and Their Allies. Botany, Cultivation and Utilization, , New York, USA: Interscience
Kamenetsky, R., Diversity in fertility potential and organo-sulphur compounds among garlics from Central Asia (2005) Biodivers. Conserv, 14, pp. 281-295
Kharl, A., Lawande, K.E., Negi, K.S., Microsatellite marker based analysis of genetic diversity in short day tropical Indian onion and cross amplification in related Allium spp (2010) Genet. Resour. Crop Evol, 58, pp. 741-754
Kim, S., Pink (P), a new locus responsible for a pink trait in onions (Allium cepa) resulting from natural mutations of anthocyanidin synthase (2004) Mol. Genet. Genomics, 272, pp. 18-27
Kim, S., Identification of two novel inactive DFR-A alleles responsible for failure to produce anthocyanin and development of a simple PCR-based molecular marker for bulb color selection in onion (Allium cepa L.) (2009) Theor. Appl. Genet, 118, pp. 1391-1399
King, J.J., Bradeen, J.M., Havey, M.J., Variability for restriction fragment-length polymorphisms (RFLPs) and relationships among elite commercial inbred and virtual hybrid onion populations (1998) J. Am. Soc. Hortic. Sci, 123, pp. 1034-1037
Klaas, M., Friesen, N., Molecular markers in Allium (2002) Allium Crop Science: Recent Advances, pp. 159-186. , Rabinowitch H.D. & Currah L., eds., Wallingford, UK
New York, USA: CABI Publishing
Kuhl, J.C., A unique set of 11,008 onion expressed sequence tags reveals expressed sequence and genomic differences between the monocot orders Asparagales and Poales (2004) Plant Cell, 16, pp. 114-125
Leland, R.H., (1987) Manuel Pour La sélection Du Sorgho, , 2e éd. Andhra Pradesh, Inde : ICRISAT
Martin, W.J., Genetic mapping of expressed sequences in onion and in silico comparisons with rice show scant colinearity (2005) Mol. Genet. Genomics, 274, pp. 197-204
McCallum, J., Genetic diversity analysis and single-nucleotide polymorphism marker development in cultivated bulb onion based on expressed sequence tag-simple sequence repeat markers (2008) J. Am. Soc. Hortic. Sci, 133, pp. 810-818
Moumouni, A.D., (2006) Les Effets De La réappropriation De La Culture Du « Violet De Galmi » Par Les Producteurs d’oignon De La région De Tahoua – NIGER, Sur La Dynamique Du Territoire Local, l’organisation Sociale Et économique, , Thèse de doctorat : Université de Toulouse - Le Mirail (France)
Nabos, J., L’amélioration de l’oignon (Allium cepa L.) au Niger (1976) Agron. Trop, 31 (4), pp. 387-397
Peffley, E.B., Orozco-Castillo, C., Polymorphism of isozymes within plant introductions of A. Cepa L. And A. Fistulosum L (1987) Hortscience, 22, pp. 956-957
Peffley, E.B., Hou, A., Bulb-type onion introgressants posessing Allium fistulosum L. Genes recovered from interspecific hybrid backcrosses between A. Cepa L. And A. Fistulosum L (2000) Theor. Appl. Genet, 100 (3-4), pp. 528-534
Reiman, H., Genetic factors for pigmentation in the onion and their relation to disease resistance (1931) J. Agric. Res, 42, pp. 251-278
Rouamba, A., Sarr, A., Ricroch, A., Dynamic management of genetic ressource of Allium cepa L. (onion) in west Africa (1997) Acta Hortic, 433, pp. 185-189
Rouamba, A., Sandmeier, M., Sarr, A., Ricroch, A., Allozyme variation within and among populations of onion (Allium cepa L.) from West Africa (2001) Theor. Appl. Genet, 103, pp. 855-861
Rouamba, A., Ricroch, A., La phosphoglucoisomérase et la malate deshydrogénase : Deux nouveaux systèmes enzymatiques polymorphes chez l’oignon (2006) Agron. Afr, 18 (2), pp. 135-144
Schweisguth, B., Étude d’un nouveau type de stérilité mâle chez l’oignon, Allium cepa L (1973) Ann. Amelior. Plantes, 23, pp. 221-233
Shigyo, M., Kik, C., Onion (2008) Vegetables II: Fabaceae, Liliaceae, Solanaceae, and Umbelliferae, pp. 121-159. , Prohens J. & Nuez F., eds., New York, USA: Springer
Silué, S., Fondio, L., Coulibaly, M.Y., Magein, H., Sélection de variétés d’oignon (Allium cepa L.) adaptées au nord de la Côte d’Ivoire (2003) Tropicultura, 21 (3), pp. 129-134
Van Raamsdonk, L., Biodiversity assessment based on cpDNA and crossability analysis in selected species of Allium subgenus (2003) Rhizirideum. Theor. Appl. Genet, 107, pp. 1048-1058
Wilkie, S.E., Isaac, P.G., Slater, R.J., Random amplified polymorphic DNA (RAPD) markers for genetic analysis in Allium (1993) Theor. Appl. Genet, 86, pp. 497-504
