Article (Scientific journals)
Small RNA deep sequencing identifies viral microRNAs during malignant catarrhal fever induced by alcelaphine herpesvirus 1
Sorel, Océane; Tuddenham, Lee; Myster, Françoise et al.
2015In Journal of General Virology, 96 (11), p. 3360-3372
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Abstract :
[en] Alcelaphine herpesvirus 1 (AlHV-1) is a c-herpesvirus (c-HV) carried asymptomatically by wildebeest. Upon cross-species transmission, AlHV-1 induces a fatal lymphoproliferative disease named malignant catarrhal fever (MCF) in many ruminants, including cattle, and the rabbit model. Latency has been shown to be essential for MCF induction. However, the mechanisms causing the activation and proliferation of infected CD8+T cells are unknown. Many c-HVs express microRNAs (miRNAs). These small non-coding RNAs can regulate expression of host or viral target genes involved in various pathways and are thought to facilitate viral infection and/or mediate activation and proliferation of infected lymphocytes. The AlHV-1 genome has been predicted to encode a large number of miRNAs. However, their precise contribution in viral infection and pathogenesis in vivo remains unknown. Here, using cloning and sequencing of small RNAs we identified 36 potential miRNAs expressed in a lymphoblastoid cell line propagated from a calf infected with AlHV-1 and developing MCF. Among the sequenced candidate miRNAs, 32 were expressed on the reverse strand of the genome in two main clusters. The expression of these 32 viral miRNAs was further validated using Northern blot and quantitative reverse transcription PCR in lymphoid organs of MCF- developing calves or rabbits. To determine the concerted contribution in MCF of 28 viral miRNAs clustered in the non-protein-coding region of the AlHV-1 genome, a recombinant virus was produced. The absence of these 28 miRNAs did not affect viral growth in vitro or MCF induction in rabbits, indicating that the AlHV-1 miRNAs clustered in this non-protein-coding genomic region are dispensable for MCF induction.
Disciplines :
Veterinary medicine & animal health
Author, co-author :
Sorel, Océane ;  Université de Liège > Immunologie et vaccinologie
Tuddenham, Lee
Myster, Françoise ;  Université de Liège > Immunologie et vaccinologie
Palmeira, Leonor ;  Université de Liège > Département de productions animales > GIGA-R : Génomique animale
Kerkhofs, Pierre
Pfeffer, Sébastien
Vanderplasschen, Alain ;  Université de Liège > Immunologie et vaccinologie
Dewals, Benjamin G  ;  Université de Liège > Immunologie et vaccinologie
Language :
English
Title :
Small RNA deep sequencing identifies viral microRNAs during malignant catarrhal fever induced by alcelaphine herpesvirus 1
Publication date :
November 2015
Journal title :
Journal of General Virology
ISSN :
0022-1317
eISSN :
1465-2099
Publisher :
Society for General Microbiology, London, United Kingdom
Volume :
96
Issue :
11
Pages :
3360-3372
Peer reviewed :
Peer Reviewed verified by ORBi
Available on ORBi :
since 04 January 2016

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