Article (Scientific journals)
BEGAIN: a novel imprinted gene that generates paternally expressed transcripts in a tissue- and promoter-specific manner in sheep.
Smit, Maria A; Tordoir, Xavier; Gyapay, Gabor et al.
2005In Mammalian Genome, 16 (10), p. 801-14
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Keywords :
Animals; DNA Methylation; Gene Expression Regulation, Developmental; Genomic Imprinting; Genotype; Membrane Proteins/genetics; Muscle, Skeletal; Muscular Diseases/genetics/veterinary; Mutation; Nerve Tissue Proteins/genetics/metabolism; Phenotype; Polymorphism, Single Nucleotide; Regulatory Sequences, Nucleic Acid; Reverse Transcriptase Polymerase Chain Reaction; Sequence Alignment; Sequence Homology, Nucleic Acid; Sheep Diseases/genetics; Sheep, Domestic/genetics; Transcription Factors/genetics/metabolism
Abstract :
[en] In this article we describe the organization of the ovine BEGAIN gene, located 138 kb proximally from the imprinted DLK1 gene and 203 kb from the CLPG mutation that causes the callipyge phenotype. We have shown that in sheep BEGAIN is ubiquitously expressed, including in skeletal muscle, throughout development. We have identified four major BEGAIN transcripts resulting from a combination of alternate promoter usage and alternative splicing. In ovine brain, kidney, liver, and skeletal muscle, these four BEGAIN transcripts exhibited paternal or biallelic expression in a tissue- and promoter-specific manner. Our results indicate that the CLPG mutation does not alter transcript levels of BEGAIN, contrary to its effect on a core cluster of genes in the DLK1-GTL2 domain. Thus, although the BEGAIN gene represents another paternally expressed gene in the ovine DLK1-GTL2 imprinted domain, its expression is not governed by the long-range regulatory element that contains the CLPG mutation.
Disciplines :
Genetics & genetic processes
Author, co-author :
Smit, Maria A
Tordoir, Xavier ;  Université de Liège - ULiège > Dép. d'électric., électron. et informat. (Inst.Montefiore) > Systèmes et modélisation
Gyapay, Gabor
Cockett, Noelle E
Georges, Michel   ;  Université de Liège - ULiège > Département de productions animales > GIGA-R : Génomique animale
Charlier, Carole   ;  Université de Liège - ULiège > Département de productions animales > GIGA-R : Génomique animale
 These authors have contributed equally to this work.
Language :
English
Title :
BEGAIN: a novel imprinted gene that generates paternally expressed transcripts in a tissue- and promoter-specific manner in sheep.
Publication date :
2005
Journal title :
Mammalian Genome
ISSN :
0938-8990
eISSN :
1432-1777
Publisher :
Springer Verlag, New York, United States - New York
Volume :
16
Issue :
10
Pages :
801-14
Peer reviewed :
Peer Reviewed verified by ORBi
Available on ORBi :
since 09 November 2011

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