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See detailMolecular biology contribution to animal production in 1994
Renaville, Robert ULg

Conference (1994)

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See detailMolecular biology in support of an old paradigm about the induction of flowering
Périlleux, Claire ULg

in Flowering Newsletter (1995), 20

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See detailMolecular Biology of Antimicrobial resistance
Melin, Pierrette ULg

Conference (1998, October)

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See detailMolecular Biology of Bovine Herpesvirus Type 4
Thiry, Etienne ULg; Bublot, M.; Dubuisson, J. et al

in Veterinary Microbiology (1992), 33(1-4), 79-92

Bovine herpesvirus type 4 (BHV-4) is a ubiquitous virus of cattle. Its genome is a 144 +/- 6 kb double-stranded DNA consisting of a unique central part (L-DNA) flanked at both ends by tandem repeats ... [more ▼]

Bovine herpesvirus type 4 (BHV-4) is a ubiquitous virus of cattle. Its genome is a 144 +/- 6 kb double-stranded DNA consisting of a unique central part (L-DNA) flanked at both ends by tandem repeats called polyrepetitive DNA (prDNA or H-DNA). The overall arrangement of genes has been obtained by the analysis of homologies between short BHV-4 DNA sequences and corresponding genes of Epstein-Barr virus (EBV) and herpesvirus saimiri (HVS). The gene expression is temporally regulated. Glycoprotein precursor p (gp10/gp17) is expressed as gamma 1 polypeptide. Glycoproteins gp1, gp8, gp11 and their precursors are gamma 2 proteins. The analysis of strain variations allows the definition of two types of strains, based on the DNA patterns: the Movar 33/63-like and the DN 599-like strains. Only the M40 strain, isolated in India, fails to fit this classification. The genomic variations have been compiled to build a dendrogram showing three levels of divergence between BHV-4 strains or isolates. The available molecular data indicate that the BHV-4 genome shares much similarity with the DNA of EBV and HVS, two representative members of the gammaherpesvirinae. BHV-4 may therefore be classified in the subfamily gammaherpesvirinae. [less ▲]

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See detailMolecular Biology of tilapia prolactins
Swennen, E.; Sekkali, B.; Poncelet, A. C. et al

in Fundamental and applied research for aquaculture (1993)

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See detailMolecular biology, phytochemistry and bioactivity of three endemic Aloe species from Mauritius and Reunion Islands.
Ranghoo-Sanmukhiya, M.; Govinden-Soulange, J.; Lavergne, C. et al

in Phytochemical Analysis (2010)

Introduction - Aloe tormentorii, A. purpurea and A. macra are used as multipurpose folk medicines in Reunion and Mauritius Islands and are mistaken for the introduced Aloe vera.Objective - To compare the ... [more ▼]

Introduction - Aloe tormentorii, A. purpurea and A. macra are used as multipurpose folk medicines in Reunion and Mauritius Islands and are mistaken for the introduced Aloe vera.Objective - To compare the phytochemical, antimicrobial and DNA profiles of Aloe endemic to Mauritius and Reunion with the profiles of A. vera.Methodology - Leaf extracts of these Aloe species were analysed using standard phytochemical screening techniques, TLC and by HPLC. These extracts were also assayed for antimicrobial activity using microdilution techniques. Genetic diversity was studied using RAPD markers.Results - Phytochemical and antimicrobial assays and RAPD analysis showed that Mascarene Aloe species were very different from A. vera.Conclusion - This study is the first report highlighting the differences between Aloe sp.p from Mascarene and Aloe vera at the metabolic and genomic level. Copyright (c) 2010 John Wiley & Sons, Ltd. [less ▲]

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See detailMolecular biomimetics applied to medical devices
Van de Weerdt, Cécile ULg; Vreuls, Christelle ULg; Genin, Alexis ULg et al

Poster (2012, April 18)

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See detailMolecular biomimetics applied to medical devices
Van de Weerdt, Cécile ULg; Archembeau, Catherine; Vreuls, Christelle ULg et al

Poster (2012, May 05)

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See detailMolecular certification in chicken meat channel.
Haezebroeck, Valérie; Renaville, Robert ULg; Parmentier, Isabelle et al

in Journal of Animal Science (2001), 79(Suppl 1 N°1072), 260

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See detailMolecular characterisation of a versatile peroxidase from a Bjerkandera strain
Moreira, Patricia R.; Duez, Colette ULg; Dehareng, Dominique ULg et al

in Journal of Biotechnology (2005), 118(4), 339-352

The cloning and sequencing of the rbpa gene coding for a versatile peroxidase from a novel Bjerkandera strain is hereby reported. The 1777 bp isolated fragment contained a 1698 bp peroxidase-encoding gene ... [more ▼]

The cloning and sequencing of the rbpa gene coding for a versatile peroxidase from a novel Bjerkandera strain is hereby reported. The 1777 bp isolated fragment contained a 1698 bp peroxidase-encoding gene, interrupted by 11 introns. The 367 amino acid-deduced sequence includes a 27 amino acid-signal peptide. The molecular model, built via homology modelling with crystal structures of four fungal peroxidases, highlighted the amino acid residues putatively involved in manganese binding and aromatic substrate oxidation. The potential heme pocket residues (R44, F47, H48, E79, N85, H177, F194 and D239) include both distal and proximal histidines (H48 and H177). RBP possesses potential calcium-binding residues (D49, G67, D69, S71, S178, D195, T197, I200 and D202) and eight cysteine residues (C3, C15, C16, C35, C121, C250, C286, C316). In addition, RIBP includes residues involved in substrate oxidation: three acidic residues (E37, E41 and D183)-putatively involved in manganese binding and H83 and W172-potentially involved in oxidation of aromatic substrates. Characterisation of nucleotide and amino acid sequences include RBP in versatile peroxidase group sharing catalytic properties of both UP and MnP. In addition, the RBP enzyme appears to be closely related with the ligninolytic peroxidases from the Trametes versicolor strain. (C) 2005 Published by Elsevier B.V. [less ▲]

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See detailMolecular characterization of a specific thiamine triphosphatase widely expressed in mammalian tissues
Lakaye, Bernard ULg; Makarchikov, Alexander F; Antunes, Adelio F et al

in Journal of Biological Chemistry (2002), 277(16), 13771-13777

Thiamine triphosphate (ThTP) is found at low concentrations in most animal tissues, and recent data suggest that it may act as a phosphate donor for the phosphorylation of some proteins. In the mammalian ... [more ▼]

Thiamine triphosphate (ThTP) is found at low concentrations in most animal tissues, and recent data suggest that it may act as a phosphate donor for the phosphorylation of some proteins. In the mammalian brain, ThTP synthesis is rapid, but its steady-state concentration remains low, presumably because of rapid hydrolysis. In this report we purified a soluble thiamine triphosphatase (ThTPase; EC 3.6.1.28) from calf brain. The bovine ThTPase is a 24-kDa monomer, hydrolyzing ThTP with virtually absolute specificity. Partial sequence data obtained from the purified bovine enzyme by tandem mass spectrometry were used to search the GenBank(TM) data base. A significant identity was found with only one human sequence, the hypothetical 230-amino acid protein MGC2652. The coding regions from human and bovine brain mRNA were amplified by reverse transcription-PCR, cloned in Escherichia coli, and sequenced. The human open reading frame was expressed in E. coli as a GST fusion protein. Transformed bacteria had a high isopropyl-beta-D-thiogalactopyranoside-inducible ThTPase activity. The recombinant ThTPase had properties similar to those of human brain ThTPase, and it was specific for ThTP. The mRNA was expressed in most human tissues but at relatively low levels. This is the first report of a molecular characterization of a specific ThTPase. [less ▲]

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See detailMOLECULAR CHARACTERIZATION OF CLOSTRIDIUM DIFFICILE STRAINS FROM ELDERLY CARE HOME RESIDENTS
Rodriguez Diaz, Cristina ULg

Poster (2013, October 11)

Clostridium difficile is the primary cause of nosocomial diarrhoea and pseudomembranous colitis after use of antibiotics. Production of toxins A and B are the main virulence factors responsible for its ... [more ▼]

Clostridium difficile is the primary cause of nosocomial diarrhoea and pseudomembranous colitis after use of antibiotics. Production of toxins A and B are the main virulence factors responsible for its pathogenicity. Increasing age, several co-morbidities, environmental contamination, antibiotic exposure and other intestinal perturbations appear to be the greatest risk factors for C. difficile infection (CDI). Therefore, elderly care home residents are considered particularly vulnerable to CDI. The aim of this study was to evaluate and follow the prevalence of C. difficile in a Belgian nursing home and to characterize the C. difficile strains isolated from faeces of elderly care home residents. [less ▲]

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See detailMolecular characterization of embryogenesis in Phaseolus
Abid, Ghassen ULg

Doctoral thesis (2011)

Chez les végétaux supérieurs, l’embryogenèse est une phase clé du développement au cours de laquelle l’embryon établit les principales structures de la future plante. La compréhension des processus ... [more ▼]

Chez les végétaux supérieurs, l’embryogenèse est une phase clé du développement au cours de laquelle l’embryon établit les principales structures de la future plante. La compréhension des processus moléculaires et physiologiques menant à la formation de la graine est donc d’un intérêt agronomique majeur. Chez Phaseolus la caractérisation moléculaire de l’embryogenèse permet de mieux comprendre les mécanismes du développement embryonnaire et de son dysfonctionnement observé chez les hybrides interspécifiques. Cette thèse s’inscrit dans ce cadre et vise à identifier et caractériser des gènes clés impliqués dans le développement de l'embryon chez Phaseolus. Des hybridations interspécifiques ont été réalisées entre l’espèce P.vulgaris L. (cultivar NI637) utilisée comme parent mâle et l’espèce P. coccineus L. (cultivar NI16) utilisée comme parent femelle. Des analyses ont aussi été effectuées sur un mutant obtenu par mutagenèse chimique à l'EMS (Ethyl Méthyl Sulfonate) de graines de la variété BAT93 de P.vulgaris. Une étude histologique comparative a permis de suivre la dynamique de l’embryogenèse du haricot commun à partir d’embryons prélevés 3 à 12 jours après la pollinisation et provenant de plantes normales et déficients dans la production de graines. Les embryons de P. vulgaris se développent plus rapidement par rapport à ceux issus du mutant EMS. Ces derniers présentent des anomalies au niveau de l’embryon et du suspenseur. La caractérisation fonctionnelle de deux gènes candidats MIPS (myo-inositol phosphate synthase) et Sus (sucrose synthase) a été réalisée par RT-PCR quantitative et hybridation in situ suite à une étude spatio-temporelle d’expression de ces deux gènes candidats au cours de développement embryonnaire chez Phaseolus. L’analyse du profil d’expression de ces deux gènes montre qu’ils sont exprimés différemment au niveau des tissus de l’embryon et du suspenseur. L’analyse in silico nous a permis de sélectionner 22 gènes candidats dont nous avons vérifié l'expression au cours de développement de la graine chez Phaseolus. Des variations au niveau de la méthylation de l’ADN ont été déterminées chez les hybrides interspécifiques comparativement à leurs parents. La technique de l’HSS a permis d’isoler des fragments d’ADNs complémentaires différemment exprimés au cours de développement de la graine chez Phaseolus. L’analyse des séquences de ces ADNs complémentaires montre qu’ils codent pour plusieurs protéines intervenant dans le développement cellulaire et embryonnaire, en particulier le "storage protein activator" (SPA), le "pentatricopeptide repeat-containing protein" (PPR) et l’acetyl-CoA carboxylase (ACCase). La caractérisation de ces différents gènes exprimés au cours du développement de la graine, fournit de nouveaux outils susceptibles de mettre en évidence des mécanismes de dysfonctionnement embryonnaire chez le genre Phaseolus. [less ▲]

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See detailMolecular characterization of geminivirus-derived small RNAs in different plant species.
Akbergenov, Rashid; Si-Ammour, Azeddine; Blevins, Todd et al

in Nucleic acids research (2006), 34(2), 462-71

DNA geminiviruses are thought to be targets of RNA silencing. Here, we characterize small interfering (si) RNAs-the hallmarks of silencing-associated with Cabbage leaf curl begomovirus in Arabidopsis and ... [more ▼]

DNA geminiviruses are thought to be targets of RNA silencing. Here, we characterize small interfering (si) RNAs-the hallmarks of silencing-associated with Cabbage leaf curl begomovirus in Arabidopsis and African cassava mosaic begomovirus in Nicotiana benthamiana and cassava. We detected 21, 22 and 24 nt siRNAs of both polarities, derived from both the coding and the intergenic regions of these geminiviruses. Genetic evidence showed that all the 24 nt and a substantial fraction of the 22 nt viral siRNAs are generated by the dicer-like proteins DCL3 and DCL2, respectively. The viral siRNAs were 5' end phosphorylated, as shown by phosphatase treatments, and methylated at the 3'-nucleotide, as shown by HEN1 miRNA methylase-dependent resistance to beta-elimination. Similar modifications were found in all types of endogenous and transgene-derived siRNAs tested, but not in a major fraction of siRNAs from a cytoplasmic RNA tobamovirus. We conclude that several distinct silencing pathways are involved in DNA virus-plant interactions. [less ▲]

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See detailMolecular characterization of the AMPA-receptor potentiator S70340 in rat primary cortical culture: Whole-genome expression profiling.
Mourlevat, S.; Galizzi, J. P.; Guigal-Stephan, N. et al

in Neuroscience Research (2011), 70

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See detailMolecular characterization of the bovine GHRL gene
Colinet, Frédéric ULg; Portetelle, Daniel ULg; Renaville, Robert ULg

in Archiv für Tierzucht = Archives Animal Breeding (2009), 52(1), 79-84

Bovine ghrelin, a 27 amino acid pepticle, has been identified in oxyntic glands of the abomasum. It is an endogenous ligand for growth hormone secretagogue receptor and stimulates food intake and growth ... [more ▼]

Bovine ghrelin, a 27 amino acid pepticle, has been identified in oxyntic glands of the abomasum. It is an endogenous ligand for growth hormone secretagogue receptor and stimulates food intake and growth hormone secretion. The bovine GHRL gene was completely sequenced and consists of five exons and four introns. Like mouse and human GHRL genes, we found that the bovine GHRL gene also contains a first non-coding exon of 21 bp. The bovine GHRL gene codes for 116 amino acid pepticle named preproghrelin which contains the ghrelin pepticle and another pepticle similar to obestatin. Sequence analysis revealed eight polymorphisms, which are located in the non-coding sequence of the gene. [less ▲]

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See detailMolecular characterization of the caprine (Capra hircus) lymphocyte function-associated antigen-1 alpha subunit
Fett, Thomas ULg; Zecchinon, Laurent ULg; Baise, Etienne ULg et al

in BMC Veterinary Research (2005)

Background: Lymphocyte function-associated antigen-1 (LFA-1, CD11a/CD18, alpha L beta 2) is required for many cellular adhesive interactions during the immune response. Results: The Capra hircus CD11a ... [more ▼]

Background: Lymphocyte function-associated antigen-1 (LFA-1, CD11a/CD18, alpha L beta 2) is required for many cellular adhesive interactions during the immune response. Results: The Capra hircus CD11a-encoding cDNA was sequenced and compared with its human, murine, rat, bovine and ovine counterparts. Despite some focal differences, it shares all the main characteristics of its known mammalian homologues. Conclusion: Therefore, along with the caprine CD18-encoding cDNA, which has been available for a few months, the sequence data revealed here will allow the Capra hircus LFA-1 expression in vitro as a tool to explore the specificities of inflammation in the caprine species. [less ▲]

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See detailMolecular characterization of the host-pathogen relationships involved during an infection of GF-305 peach trees by the Peach latent mosaic viroid (PLMVd)
Parisi, Olivier ULg

Doctoral thesis (2011)

The Peach latent mosaic viroid (PLMVd) infects peach trees in all production areas. This pathogen is responsible of direct and indirect crop losses. However only a few data are available as regards on one ... [more ▼]

The Peach latent mosaic viroid (PLMVd) infects peach trees in all production areas. This pathogen is responsible of direct and indirect crop losses. However only a few data are available as regards on one hand the determinant of pathogenicity of this viroid and on the other hand the resistance mechanisms of plants against this pathogen. The original approach of this work was to give the foundation of this double characterization. Firstly, the role of the P8 pseudoknot, present in every sequenced PLMVd, was studied by directed mutagenesis. Secondly, the molecular response of different peach trees infected by different variants was evaluated by the use of the cDNA-AFLP. The main objective of this thesis was to identify a metabolic pathway implicated in the plant defence against the PLMVd. In the term of this work, it seemed that the P8 pseudoknot was implicated either in the stability or in the replication of the viroid into the infected cells. Indeed, the inoculated variant (with a destabilized pseudoknot) has shown a reduced replication during the cultural season. In spite of the presence of the mutated variant in the plants, no symptom was observed on the peach tree leaves. However, we cannot conclude if this absence of symptom is due to the low viroid quantity either to an implication of the pseudo-knot in the pathogenicity of the PLMVd. The characterization of the gene expression in the infected peach trees has allowed to highlight that the PLMVd represses genes implicated in the photosynthesis and more specifically genes involved in the protection of the two photosystems. This particular gene expression in the infected leaves was linked to the chlorosis and mosaic induced by the PLMVd. However, we cannot conclude with certitude if these symptoms are a cause or a consequence of this particular genes expression. The cDNA-AFLP has also allowed to identify the repression of genes coding for heat shock proteins (HSPs) in symptomatic leaves. These proteins generally have a role in the protein folding, assembly, translocation, stabilization and degradation. The regulation of their expression may have a great influence in the infected plants and, maybe, play a role in the symptoms expression. The gene coding for the novel cap-binding protein (nCBP) was also identified has repressed in the symptomatic leaves. The biological role of these proteins is unclear but it seems that these proteins act in the regulation of the mRNA translation. The repression of nCBP may thus have an important impact and to destabilize various biological pathways. Finally, two genes implicated in the plant defence were identified. One coding for a polygalacturonase inhibitor (over-expressed in symptomatic leaves) and the other one coding for a thiamine intermediate (involved in the SAR and over-expressed in the non-symptomatic leaves). The role of these proteins in the plant defence against the PLMVd is however unclear. To our knowledge, this is the first work where the host-pathogen relationship established during a PLMVd infection are studied. This is also the first time were the gene expression is linked to the viroid-induced symptoms. [less ▲]

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