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See detailInsights into a million-year-scale Rhenohercynian carbonate platform evolution through a multi-disciplinary approach: example of a GIvetian carbonate record from Belgium
Pas, Damien ULg; Da Silva, Anne-Christine ULg; Devleeschouwer, Xavier et al

in Geological Magazine (2016)

In this paper we formulate answers to three important questions related to Givetian carbonate records and their use for reconstructing million-year past palaeoenvironmental changes. First, we provide ... [more ▼]

In this paper we formulate answers to three important questions related to Givetian carbonate records and their use for reconstructing million-year past palaeoenvironmental changes. First, we provide detailed illustrations of the fascinating diversity that shaped a significant shallow reefal platform during the early- to late-Givetian in the Rhenohercynian Ocean; secondly we improve the sedimentological model of the extensive Givetian carbonate platform in the Dinant Basin and thirdly we evaluate the application of magnetic susceptibility (MS) as a tool for long-term trend correlations and palaeoenvironmental reconstructions. These goals are reached by making sedimentological, geophysical and geochemical study of the La Thure section. Through the early-late Givetian interval we discerned eighteen microfacies ranging from a homoclinal ramp to a discontinuously rimmed shelf and then a drowning shelf. The comparison of these sedimentological results with those published in the south of the Dinant Syncline allowed us to provide an up to date model of the vertical and lateral environmental development for one of the largest Givetian carbonate platforms in Europe. This comparison also increased the knowledge on the facies belts distribution into the Dinant Basin and allowed us to highlight the Taghanic Event. Palaeo-redox proxies reveal a substantial change in the oxygenation level, from oxygen-depleted to more oxic condition, between middle and late Givetian. We demonstrated the relationship between variation in MS values and proxies for siliciclastic input (such as Si, Al). The La Thure is considered as a key section for the understanding of internal shelf settings bordering Laurussia’s south-eastern margin. [less ▲]

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See detailInsights into abundant rumen ureolytic bacterial community using rumen simulation system
Jin, Di; Zhao, Shengguo; Wang, Pengpeng et al

in Frontiers in Microbiology (2016), 7(1006),

Urea, a non-protein nitrogen for dairy cows, is rapidly hydrolyzed to ammonia by urease produced by ureolytic bacteria in the rumen, and the ammonia is used as nitrogen for rumen bacterial growth. However ... [more ▼]

Urea, a non-protein nitrogen for dairy cows, is rapidly hydrolyzed to ammonia by urease produced by ureolytic bacteria in the rumen, and the ammonia is used as nitrogen for rumen bacterial growth. However, there is limited knowledge with regard to the ureolytic bacteria community in the rumen. To explore the ruminal ureolytic bacterial community, urea, or acetohydroxamic acid (AHA, an inhibitor of urea hydrolysis) were supplemented into the rumen simulation systems. The bacterial 16S rRNA genes were sequenced by Miseq high-throughput sequencing and used to reveal the ureoltyic bacteria by comparing different treatments. The results revealed that urea supplementation significantly increased the ammonia concentration, and AHA addition inhibited urea hydrolysis. Urea supplementation significantly increased the richness of bacterial community and the proportion of ureC genes. The composition of bacterial community following urea or AHA supplementation showed no significant difference compared to the groups without supplementation. The abundance of Bacillus and unclassified Succinivibrionaceae increased significantly following urea supplementation. Pseudomonas, Haemophilus, Neisseria, Streptococcus, and Actinomyces exhibited a positive response to urea supplementation and a negative response to AHA addition. Results retrieved from the NCBI protein database and publications confirmed that the representative bacteria in these genera mentioned above had urease genes or urease activities. Therefore, the rumen ureolytic bacteria were abundant in the genera of Pseudomonas, Haemophilus, Neisseria, Streptococcus, Actinomyces, Bacillus, and unclassified Succinivibrionaceae. Insights into abundant rumen ureolytic bacteria provide the regulation targets to mitigate urea hydrolysis and increase efficiency of urea nitrogen utilization in ruminants. [less ▲]

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See detailInsights into bacterial cellulose biosynthesis by functional metagenomics on Antarctic soil samples.
Berlemont, Renaud ULg; Delsaute, Maud ULg; Pipers, Delphine ULg et al

in ISME Journal (The) (2009), 3(9), 1070-1081

In this study, the mining of an Antarctic soil sample by functional metagenomics allowed the isolation of a cold-adapted protein (RBcel1) that hydrolyzes only carboxymethyl cellulose. The new enzyme is ... [more ▼]

In this study, the mining of an Antarctic soil sample by functional metagenomics allowed the isolation of a cold-adapted protein (RBcel1) that hydrolyzes only carboxymethyl cellulose. The new enzyme is related to family 5 of the glycosyl hydrolase (GH5) protein from Pseudomonas stutzeri (Pst_2494) and does not possess a carbohydrate-binding domain. The protein was produced and purified to homogeneity. RBcel1 displayed an endoglucanase activity, producing cellobiose and cellotriose, using carboxymethyl cellulose as a substrate. Moreover, the study of pH and the thermal dependence of the hydrolytic activity shows that RBcel1 was active from pH 6 to pH 9 and remained significantly active when temperature decreased (18% of activity at 10 degrees C). It is interesting that RBcel1 was able to synthetize non-reticulated cellulose using cellobiose as a substrate. Moreover, by a combination of bioinformatics and enzyme analysis, the physiological relevance of the RBcel1 protein and its mesophilic homologous Pst_2494 protein from P. stutzeri, A1501, was established as the key enzymes involved in the production of cellulose by bacteria. In addition, RBcel1 and Pst_2494 are the two primary enzymes belonging to the GH5 family involved in this process.The ISME Journal advance online publication, 21 May 2009; doi:10.1038/ismej.2009.48. [less ▲]

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See detailInsights into behavioral vulnerability to differential sleep pressure and circadian phase from a functional ADA polymorphism.
Reichert, Carolin F.; Maire, Micheline; Gabel, Virginie et al

in Journal of biological rhythms (2014), 29(2), 119-30

Sleep loss affects human behavior in a nonuniform manner, depending on the cognitive domain and also the circadian phase. Besides, evidence exists about stable interindividual variations in sleep loss ... [more ▼]

Sleep loss affects human behavior in a nonuniform manner, depending on the cognitive domain and also the circadian phase. Besides, evidence exists about stable interindividual variations in sleep loss-related performance impairments. Despite this evidence, only a few studies have considered both circadian phase and neurobehavioral domain when investigating trait-like vulnerability to sleep manipulation. By applying a randomized, crossover design with 2 sleep pressure conditions (40 h sleep deprivation vs. 40 h multiple naps), we investigated the influence of a human adenosine deaminase (ADA) polymorphism (rs73598374) on several behavioral measures throughout nearly 2 circadian cycles. Confirming earlier studies, we observed that under sleep deprivation the previously reported vulnerable G/A-allele carriers felt overall sleepier than G/G-allele carriers. As expected, this difference was no longer present when sleep pressure was reduced by the application of multiple naps. Concomitantly, well-being was worse in the G/A genotype under sleep loss when compared to the nap protocol, and n-back working memory performance appeared to be specifically susceptible to sleep-wake manipulation in this genotype. When considering psychomotor vigilance performance, however, a higher sensitivity to sleep-wake manipulation was detected in homozygous participants, but specifically at the end of the night and only for optimal task performance. Although these data are based on a small sample size and hence require replication (12 G/A- and 12 G/G-allele carriers), they confirm the assumption that interindividual differences regarding the effect of sleep manipulation highly depend on the cognitive task and circadian phase, and thus emphasize the necessity of a multimethodological approach. Moreover, they indicate that napping might be suitable to counteract endogenously heightened sleep pressure depending on the neurobehavioral domain. [less ▲]

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See detailInsights into hallucinations in schizophrenia: novel treatment approaches
Aleman, André; Laroi, Frank ULg

in Expert Review of Neurotherapeutics (2011), 11

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See detailInsights into nuclear organization in plants as revealed by the dynamic distribution of Arabidopsis SR splicing factors
Tillemans, Vinciane ULg; Leponce, Isabelle ULg; Rausin, Glwadys ULg et al

in Plant Cell (2006), 18(11), 3218-3234

Serine/arginine-rich (SR) proteins are splicing regulators that share a modular structure consisting of one or two N-terminal RNA recognition motif domains and a C-terminal RS-rich domain. We investigated ... [more ▼]

Serine/arginine-rich (SR) proteins are splicing regulators that share a modular structure consisting of one or two N-terminal RNA recognition motif domains and a C-terminal RS-rich domain. We investigated the dynamic localization of the Arabidopsis thaliana SR protein RSZp22, which, as we showed previously, distributes in predominant speckle-like structures and in the nucleolus. To determine the role of RSZp22 diverse domains in its nucleolar distribution, we investigated the subnuclear localization of domain-deleted mutant proteins. Our results suggest that the nucleolar localization of RSZp22 does not depend on a single targeting signal but likely involves different domains/motifs. Photobleaching experiments demonstrated the unrestricted dynamics of RSZp22 between nuclear compartments. Selective inhibitor experiments of ongoing cellular phosphorylation influenced the rates of exchange of RSZp22 between the different nuclear territories, indicating that SR protein mobility is dependent on the phosphorylation state of the cell. Furthermore, based on a leptomycin B- and fluorescence loss in photobleaching-based sensitive assay, we suggest that RSZp22 is a nucleocytoplasmic shuttling protein. Finally, with electron microscopy, we confirmed that RSp31, a plant-specific SR protein, is dynamically distributed in nucleolar cap-like structures upon phosphorylation inhibition. Our findings emphasize the high mobility of Arabidopsis SR splicing factors and provide insights into the dynamic relationships between the different nuclear compartments. [less ▲]

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See detailInsights into oxygen transport and net community production in sea ice from oxygen, nitrogen and argon concentrations
Zhou, Jiayun ULg; Delille, Bruno ULg; Brabant, F. et al

in Biogeosciences (2014), 11

We present the evolution of O2 standing stocks, saturation levels and concentrations in landfast sea ice, collected in Barrow (Alaska), from February to June 2009. The comparison of the standing stocks ... [more ▼]

We present the evolution of O2 standing stocks, saturation levels and concentrations in landfast sea ice, collected in Barrow (Alaska), from February to June 2009. The comparison of the standing stocks and saturation levels of O2 against those of N2 and Ar suggests that the dynamic of O2 in sea ice strongly depends on physical processes (gas incorporation and subsequent transport). We then discuss on the use of O2 / Ar and O2 / N2 to correct for the physical contribution and to determine the biological contribution (NCP) to O2 supersaturations. We conclude that O2 / Ar suits better than O2 / N2, because O2 / N2 is more sensitive due to the relative abundance of O2, N2 and Ar, and less biased when gas bubble formation and gas diffusion are maximized. We further estimate the NCP in the impermeable layers during ice growth and in the permeable layers during ice decay. Our results indicate that NCP contributed to a~release of carbon to the atmosphere in the upper ice layers, but to an uptake of carbon at sea ice bottom. Overall, seawater (rather than the atmosphere) may be the main supplier of carbon for sea ice microorganisms. [less ▲]

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See detailInsights into the ancient methods of preparation of Prussian blue pigments by high-resolution powder diffraction and PDF analysis
Samain, Louise ULg; Martinetto, Pauline; Bordet, Pierre et al

Conference (2011, September 09)

Detailed reference viewed: 63 (3 ULg)
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See detailInsights into the Defense-Related Events Occuring in Plant Cells Following Perception of Surfactin-Type Lipopeptide from Bacillus subtilis
Jourdan, Emmanuel ULg; Henry, Guillaume; Duby, F. et al

in Molecular Plant-Microbe Interactions [=MPMI] (2009), 22(4), 456-468

Multiple strains of Bacillus subtilis were demonstrated to stimulate plant defense responses, and cyclic lipopeptides may be involved in the elicitation of this induced systemic resistance phenomenon ... [more ▼]

Multiple strains of Bacillus subtilis were demonstrated to stimulate plant defense responses, and cyclic lipopeptides may be involved in the elicitation of this induced systemic resistance phenomenon. Here, we further investigated molecular events underlying the interaction between wuch lipopeptides and plant cells. Addition of surfactin but not fengycin or iturin in the micromolar range to tobacco cell suspensions induced defense-related early events such as extracellular medium alkalinization coupled with ion fluxes and reactive oxygen species production. Surfactin also stimulated the defense enzymes phenylalanine ammonia lyase and lipoxygenase and modified the pattern of phenolics produced by the elicited cells. The occurence of these surfactin-elicited early events is closely related to Ca2+ influx and dynamic changes in protein phosphorylation but is not associed with any marked phytotoxicity or adverse effect on the integrity and growth potential of the treated tobacco cells. [less ▲]

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See detailInsights into the metagenomic approach : identification and characterization of cellulases involved in bacterial cellulose synthesis
Berlemont, Renaud ULg; Delsaute, Maud ULg; Galleni, Moreno ULg

Conference (2010, March 22)

the mining of an Antarctic soil sample by functional metagenomics allowed the isolation of a cold-adapted protein (RBcel1) that hydrolyzes only carboxymethyl cellulose. The new enzyme is related to family ... [more ▼]

the mining of an Antarctic soil sample by functional metagenomics allowed the isolation of a cold-adapted protein (RBcel1) that hydrolyzes only carboxymethyl cellulose. The new enzyme is related to family 5 of the glycosyl hydrolase (GH5) protein from Pseudomonas stutzeri (Pst_2494) and does not possess a carbohydrate-binding domain. The protein was produced and purified to homogeneity. RBcel1 displayed an endoglucanase activity, producing cellobiose and cellotriose, using carboxymethyl cellulose as a substrate. Moreover, the study of pH and the thermal dependence of the hydrolytic activity shows that RBcel1 was active from pH 6 to pH 9 and remained significantly active when temperature decreased (18% of activity at 10 1C). It is interesting that RBcel1 was able to synthetize non-reticulated cellulose using cellobiose as a substrate. Moreover, by a combination of bioinformatics and enzyme analysis, the physiological relevance of the RBcel1 protein and its mesophilic homologous Pst_2494 protein from P. stutzeri, A1501, was established as the key enzymes involved in the production of cellulose by bacteria. In addition, RBcel1 and Pst_2494 are the two primary enzymes belonging to the GH5 family involved in this process. [less ▲]

Detailed reference viewed: 33 (2 ULg)
See detailInsights into the pathogenic PLMVd-peach tree relationship
Parisi, Olivier ULg; Lepoivre, Philippe ULg; Jijakli, Haissam ULg et al

in International Symposium on Crop Protection: Proceeding (2015)

Detailed reference viewed: 30 (3 ULg)
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See detailInsights into the plant defense mechanisms induced by Bacillus lipopeptides
Ongena, Marc ULg; Henry, G.; Adam, A. et al

in Biology of Plant-Microbe Interactions (2010)

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See detailInsights into the plant defense mechanisms induced by Bacillus lipopeptides.
Ongena, Marc ULg; Henry, Guillaume ULg; Adam, Akram et al

Poster (2009, July)

Detailed reference viewed: 57 (8 ULg)
See detailInsights into vaccine strategy to growth hormone
Renaville, Robert ULg; Maiter, Dominique; Deaver, Dan et al

Scientific conference (1998)

Detailed reference viewed: 5 (0 ULg)