Influence of lignin in Reticulitermes santonensis: symbiotic interations investigated through proteomicsBauwens, Julien ; Tarayre, Cédric ; Brasseur, Catherine et alin Symbiosis (2013) The gut of lower termites is populated by numerous microbial species belonging to prokaryotes, fungi, yeasts and protists. These micro-organisms are organized in a complex symbiotic system, interacting ... [more ▼] The gut of lower termites is populated by numerous microbial species belonging to prokaryotes, fungi, yeasts and protists. These micro-organisms are organized in a complex symbiotic system, interacting together and with the insect host. Their likely ability to degrade ligno-cellulosic compounds could lead to improvements in second generation biofuels production. Lignin elimination represents a critical point as this polymer significantly interferes with industrial process of cellulose. Although host produces its own lignin-degrading enzymes, some symbionts may participate in digestion of lignin and its degradation products in termite gut. Here, we compared gut proteomes from R. santonensis after rearing on artificial diets composed of cellulose with and without lignin. The effect of lignin in artificial diets on different parts of the digestive tract was compared through liquid chromatography associated with tandem mass spectrometry (LC-MS/MS) experiments. Enzymatic assays were performed to characterize activities present in R. santonensis digestive tract after feeding on artificial diets. Microscopic observations of microbial communities provided some information on population balances after feeding experiment. [less ▲] Detailed reference viewed: 32 (19 ULg) Termites as a tool to improve lignocellulose biomass valorization : study of enzymatic complex in termites and its common symbionts by comprehensive metabolite profilingBrasseur, Catherine ; Bauwens, Julien ; Tarayre, Cédric et alConference (2012, November 16) Detailed reference viewed: 29 (12 ULg) Utilisation des termites comme source de microorganismes dans la filière de production du bioéthanol de seconde générationTarayre, Cédric ; Bauwens, Julien ; Brasseur, Catherine et alPoster (2012, November 14) Les termites abritent une microflore symbiotique qui intervient dans la dégradation des fibres constitutives du bois, synthétisant des enzymes capables d’hydrolyser ses composants. Les sucres ... [more ▼] Les termites abritent une microflore symbiotique qui intervient dans la dégradation des fibres constitutives du bois, synthétisant des enzymes capables d’hydrolyser ses composants. Les sucres fermentescibles libérés suite à cette hydrolyse sont utilisables dans le cadre de la production du bioéthanol de seconde génération. [less ▲] Detailed reference viewed: 26 (5 ULg) Termites artificially-fed on unusual diet and resulting enzymatic switchesBauwens, Julien ; Tarayre, Cédric ; et alPoster (2012, August) Wood-feeding termites as Reticulitermes santonensis generally feed on cellulose, hemicelluloses and lignin. However, these opportunistic insects are also able to degrade other carbohydrates, such as ... [more ▼] Wood-feeding termites as Reticulitermes santonensis generally feed on cellulose, hemicelluloses and lignin. However, these opportunistic insects are also able to degrade other carbohydrates, such as starch. The production of putative endogenous α - amylase has been previously shown in R. flavipes, as the disappearance of the major symbiotic flagellates from the hindgut. Here, we compared enzymatic activities (CMCase, MCCase, xylanase, amylase, α- and β-glucosidase) between different fractions of the digestive tract of starch-, cellulose-, and wood-fed termites. Main compounds of the artificial diets, namely starch or MCC, resulted in differential enzymatic activity. Even the substitution of wood by artificial diets itself seemed to induce changes in enzymatic activities, regardless of the main substrate in the diet, as we observed strong midgut α-glucosidase activity only for artificially-fed termites. Preliminary assays to isolate and characterize enzymes were performed using proteomic methods. [less ▲] Detailed reference viewed: 15 (2 ULg) Selection and cultivation of hydrolytic microorganisms extracted from the digestive tract of the termite Reticulitermes santonensis (3DV.1.55)Tarayre, Cédric ; Bauwens, Julien ; Matteotti, Christel et alPoster (2012, June 21) Biofuel production can be based on the use of fermentable substrates issued from the hydrolysis of lignocellulosic biomass stemming from agricultural residues and by-products. However, such substrates are ... [more ▼] Biofuel production can be based on the use of fermentable substrates issued from the hydrolysis of lignocellulosic biomass stemming from agricultural residues and by-products. However, such substrates are not easy to degrade. Enzymes (cellulases, xylanases, etc.) can be used for this purpose and pre-treatments can increase their action by providing more available extremities. The digestive tract of the termite Reticulitermes santonensis contains various microorganisms (bacteria, molds, protists) able to degrade the wood components. These microorganisms act as consortia, leading to a better hydrolysis than in the cow rumen. Our purpose is the isolation of microorganisms from termite guts in order to evaluate their potential for hydrolysis of lignocellulosic materials. This approach led us to isolate and to study a bacteria (Bacillus sp.) displaying a xylanase activity, a mold (Aspergillus sp.) displaying a cellulase activity and a chrysophyte (protist) displaying an amylase activity. [less ▲] Detailed reference viewed: 34 (12 ULg) Termites as a tool to improve lignocellulose biomass valorization: study of enzymatical complex from termites and its common symbionts by comprehensive metabolite profiling.Brasseur, Catherine ; Bauwens, Julien ; Tarayre, Cédric et alConference (2012, May) Detailed reference viewed: 45 (11 ULg) Identification and characterization of a new xylanase from Gram-positive bacteria isolated from termite gut (Reticulitermes santonensis))Matteotti, Christel ; Bauwens, Julien ; Brasseur, Catherine et alin Protein Expression & Purification (2012), 83(2), 117-127 Detailed reference viewed: 47 (26 ULg) Changes in termites feeding diets for gut micro-organisms selection and further cultivationBauwens, Julien ; Brasseur, Catherine ; Matteotti, Christel et alPoster (2011, October 02) Termites gut may overcome important dietary perturbations, initial diversity acting as key point buffering effects on host, although termites possess their own enzymatic system. Some artificial diets ... [more ▼] Termites gut may overcome important dietary perturbations, initial diversity acting as key point buffering effects on host, although termites possess their own enzymatic system. Some artificial diets permitted a simplification of the lower termites gut symbiotic system, which could be used as first step in symbionts isolation and cultivation. Preliminary assay of cultivation actually gave encouraging results. Proteomic proved to be suitable tool to investigate such a complex system. Nevertheless, for some symbionts very few genes are sequenced, which should lead to more targeted proteomic studies. Protein chromatography will allow to split up the proteome and more accurate analysis. [less ▲] Detailed reference viewed: 38 (18 ULg) Bioremediation of hydrocarbon polluted soil - Improvement of in situ bioremediation by bioaugmentation with endogenous and exogenous strainsTarayre, Cédric ![]() Poster (2010, September 03) Petroleum pollution has now become a real problem because hydrocarbons are persistent contaminants in soils and water. Contamination problems increase when ages of relevant facilities, such as oil storage ... [more ▼] Petroleum pollution has now become a real problem because hydrocarbons are persistent contaminants in soils and water. Contamination problems increase when ages of relevant facilities, such as oil storage tanks and pipelines, increase over time. The evolution of Legislation concerning soil pollution has led to the need of efficient techniques able to restore the polluted ground. Unfortunately, these techniques are expensive. Bioremediation of hydrocarbon polluted soils has been recognized as an efficient, economic and environmentally sound treatment. Particularly biostimulation and bioaugmentation are being studied in labs. A lot of studies tried to determine which method is the most efficient, but the conclusions diverge. Moreover, conditions are different in labs and contaminated sites. [less ▲] Detailed reference viewed: 14 (10 ULg) BIOREMEDIATION DE SOLS POLLUES AUX HYDROCARBURES – AMELIORATION DE LA BIOREMEDIATION IN SITU DES HYDROCARBURES PAR BIO-AUGMENTATION AU MOYEN DE SOUCHES ENDOGENES ET EXOGENESTarayre, Cédric ![]() Master's dissertation (2010) This study relates to biological treatment of hydrocarbon polluted soils. Its purpose is to establish an industrial approach of bioaugmentation and to verify its efficiency compared with biostimulation ... [more ▼] This study relates to biological treatment of hydrocarbon polluted soils. Its purpose is to establish an industrial approach of bioaugmentation and to verify its efficiency compared with biostimulation. The purpose is to simulate in situ bioremediation using experimental columns. It has been demonstrated that it’s possible to produce a biomass able to degrade hydrocarbons in a polluted soil in one month. The main way of hydrocarbon elimination in the soil is biodegradation and the amount of hydrocarbons removed by water is negligible (1 % in each case). The addition of exogenous strains into the soil leads to the best biodegradation rate (39,3 % in 63 days). An endogenous bioaugmentation was tried but the efficiency was not demonstrated. On the other hand, the use of an artificial consortium was not more satisfying. Biostimulation alone led to a biodegradation rate of 23,9 % in 63 days. The lack of oxygen was avoided and evaluated through nitrite and ammonium concentrations in the water. These concentrations were negligible and always less than 2,5 and 1 mg/l, respectively. This work also tried to develop a special technique of monitoring of microbial ecology with microplates (Biolog ECO Micro PlateTM). The results were analysed through two different statistical methods : similarity rates and principal component analysis. It has been demonstrated that the column which leads to the best biodegradation rate also shows a particular metabolic profile, according to principal component analysis. The similarity rate is only 31 % with the initial microflora. This microflora seems to change during the experience because the similarity rate between the initial and the final microfloras is only 61 %. This work proved the efficiency of exogenous bioaugmentation compared with biostimulation. It proposes to apply this technique on a large scale, but only if the amount of polluted soil is evaluated before. [less ▲] Detailed reference viewed: 201 (22 ULg) |
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