References of "Ongena, Marc"
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See detailThe Effect of Nutrients on the Degradation of Hydrocarbons in Mangrove Ecosystems by Microorganisms
Semboung Lang, Firmin ULg; Tarayre, Cédric ULg; Destain, Jacqueline ULg et al

in International Journal of Environmental Research (2016), 10(4), 583-592

Mangrove ecosystems are areas prone to various types of pollution, especially hydrocarbons. These hydrocarbons mostly stem from human activities such as spills coming from offshore oil operations, runoff ... [more ▼]

Mangrove ecosystems are areas prone to various types of pollution, especially hydrocarbons. These hydrocarbons mostly stem from human activities such as spills coming from offshore oil operations, runoff from surrounding urban areas or atmospheric deposition. This pollution causes the decline of mangroves, which results in an imbalance in the functioning of this particular ecosystem with damages to the microbiota. Biodegradation allows to restore these ecosystems. This biodegradation can only be effective in specific environmental conditions. The presence of nutrients, which stimulate bacterial growth and promote biodegradation, is a key parameter to be considered. During this experiment, we achieved biodegradation tests to assess the effect of nitrogen and phosphorus on the process. The results showed that the biodegradation rates were strongly bound to the presence of nutrients. The degradation rates depended on the medium. The treatment that reached the best rate of degradation of diesel after 10 days was the one using 20% of a nutrient solution (MSM) containing nitrogen and phosphorus. This treatment led to a maximal degradation of 84.7% ± 4.7% obtained in the flasks containing 20% of a nutrient solution (MSM) containing nitrogen and phosphorus. [less ▲]

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See detailBiodegradation of Polycyclic Aromatic Hydrocarbons in Mangrove Sediments Under Different Strategies: Natural Attenuation, Biostimulation, and Bioaugmentation with Rhodococcus erythropolis T902.1
Semboung Lang, Firmin ULg; Destain, Jacqueline ULg; Delvigne, Frank ULg et al

in Water, Air & Soil Pollution (2016)

Polycyclic aromatic hydrocarbons (PAHs) are pollutants that occur in mangrove sediments. Their removal by bacteria often depends on specific characteristics as the number of benzene rings they possess and ... [more ▼]

Polycyclic aromatic hydrocarbons (PAHs) are pollutants that occur in mangrove sediments. Their removal by bacteria often depends on specific characteristics as the number of benzene rings they possess and their solubility. Their removal also depends on environmental factors, such as pH, temperature, oxygen, and the ability of the endogenous or exogenous microflora to metabolize hydrocarbons.With the aim of treating mangrove sediments polluted by hydrocarbons in a biological way, a biodegradation experiment was conducted using mangrove sediments artificially contaminated with a mixture of four PAHs. The study used Rhodococcus erythropolis as an exogenous bacterial strain in order to assess the biodegradation of the PAH mixture by natural attenuation, biostimulation, bioaugmentation, and a combination of biostimulation and bioaugmentation. The results showed that the last three treatments were more efficient than natural attenuation. The biostimulation/bioaugmentation combination proved to be the most effective PAH degradation treatment. [less ▲]

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See detailCaractérisation des mécanismes impliqués dans la perception de rhamnolipides naturels et synthétiques chez Arabidopsis thaliana
Luzuriaga Loaiza, Walter ULg; Schellenberger, Romain; Obounou Akong, Firmin et al

Scientific conference (2016, July 05)

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See detailFrom Valeriana officinalis to cancer therapy: the success of a bio-sourced compound
Hamaïdia, Malik ULg; Barez, Pierre-Yves ULg; Carpentier, Alexandre ULg et al

in Biotechnologie, Agronomie, Société et Environnement = Biotechnology, Agronomy, Society and Environment (2016), 20

Over the centuries, bio-sourced compounds isolated from plants, insects and microorganisms have been a potent source of drugs for the treatment of human diseases. In this review, we recapitulate the story ... [more ▼]

Over the centuries, bio-sourced compounds isolated from plants, insects and microorganisms have been a potent source of drugs for the treatment of human diseases. In this review, we recapitulate the story of one of these compounds, 2-propylpentanoic acid, derived from the Valeriana officinalis flowering plant and its path to validation as a cancer treatment. [less ▲]

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See detailLeachate and leonardite Humic substances effect on in vitro root initiation and elongation of woody species
Tahiri, Abdelghani ULg; Destain, Jacqueline ULg; Thonart, Philippe ULg et al

Poster (2016, February 05)

Arise from the chemical and biological degradation of plant and animal residues and from the synthetic activities of microorganisms in the soil, humic substances (HS) are natural heterogeneous aromatic ... [more ▼]

Arise from the chemical and biological degradation of plant and animal residues and from the synthetic activities of microorganisms in the soil, humic substances (HS) are natural heterogeneous aromatic and organic compounds. These substances are chemically complex with no clearly defined chemical structure, although generalized models have been proposed. Present everywhere in the nature; they take part in basic functionalities in any ecosystems involving soils, sediments, water and landfills. They have long been recognized as plant growth promoting substances, particularly with regard to influencing nutrient uptake, root growth and architecture. They influence plant productivity directly by the stimulation of biochemical and metabolic processes or indirectly through the modification of soil characteristics and microflora activities. All together, these properties mainly affect root architecture by inducing root hairs proliferation, differentiating root cells and enhancing lateral root emergence. Experiments targeting the rooting stages in absence of interferences were conducted in vitro using HS extracted from landfill leachate and a stable commercial formulation (“Humifirst” from TRADECORP company: 12% humic acid and fulvic acid 3%) issued from leonardite. Shoots and leaves explants of silver birch (Betula pendula Roth) and black alder (Alnus glutinosa L. Gaertn) explants were treated with 10 ppm of leachate and leonardite HS for 5 days during the rooting induction/initiation phase or during rooting elongation phase. The results obtained show that treatment with a low concentration (10 ppm) during induction/initiation phase may be slightly unfavorable to the formation of roots in alder but not in birch. While, in root elongation phase, there is an increase in the number of roots per shoot only in birch. The direct effects of leachate and leonardite HS on root development vary from one species to another. [less ▲]

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See detailComparison of explant responses treated with leachate and leonardite sources of humic substances during in vitro rooting of woody plants.
Tahiri, Abdelghani ULg; Destain, Jacqueline ULg; Thonart, Philippe ULg et al

in Communications in Agricultural and Applied Biological Sciences (2016), 81(1), 158-165

As heterogeneous mixtures of compounds resulting from the physical, chemical and microbiological transformations of organic residues, humic substances (HS) are mostly recognized for their biostimulation ... [more ▼]

As heterogeneous mixtures of compounds resulting from the physical, chemical and microbiological transformations of organic residues, humic substances (HS) are mostly recognized for their biostimulation of plant growth that firstly involve the root development and architecture before further putative improvement of nutrients uptakes. To avoid the interferences currently reported from external origins, the successive steps of rooting have been carried out using shoots and isolated leaves of birch and alder vitro-plants. Extracts issued from landfill leachate (LHS) has been compared to a stable formulation from leonardite ("Humifirst" 12% humic acid 3% and fulvic acid) commercialized by TRADECORP company's (HHS). Chemical analysis showed that LHS source typically contain much higher N (mainly as ammonium (93%) and chloride concentration than HHS. Used at low concentration (10 ppm) during root induction/initiation phase, both HS sources may be slightly unfavorable to the root formation (21% of reduction in primary root number) of alder but not of birch. While, in root elongation phase, there is an increase in the primary root length and lateral root number. The direct effects of HS on in vitro root development vary from one species to another depending on the root treatment stage. Results showed that both explants type response are equivalent in the development of a complete rooting system. [less ▲]

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See detailCharacterization and Evaluation of the Potential of a Diesel-Degrading Bacterial Consortium Isolated from Fresh Mangrove Sediment
Semboung Lang, Firmin ULg; Destain, Jacqueline ULg; Delvigne, Frank ULg et al

in Water, Air & Soil Pollution (2016)

Hydrocarbons are ubiquitous and persistent organic pollutants in the environment. In wetlands and marine environments, particularly in mangrove ecosystems, their increase and significant accumulation ... [more ▼]

Hydrocarbons are ubiquitous and persistent organic pollutants in the environment. In wetlands and marine environments, particularly in mangrove ecosystems, their increase and significant accumulation result from human activities such as oil and gas exploration and exploitation operations. Remediation of these ecosystems requires the development of adequate and effective strategies. Natural attenuation, biostimulation, and bioaugmentation are all biological soil treatment techniques that can be adapted to mangroves. Our experiments were performed on samples of fresh mangrove sediments from the Cameroon estuary and mainly from the Wouri River in Cameroon. This study aims to assess the degradation potential of a bacterial consortium isolated from mangrove sediment. The principle of our bioremediation experiments is based on a series of tests designed to evaluate the potential of an active indigenous microflora and three exogenous pure strains, to degrade diesel with/without adding nutrients. The experiments were conducted in laboratory flasks and a greenhouse in microcosms. In one case, as in the other, the endogenous microflora showed that it was able to degrade diesel. Under stress of the pollutant, the endogenous microflora fits well enough in the middle to enable metabolism of the pollutant. However, the Rhodococcus strain was more effective over time. The degradation rate was 77 and 90%in the vials containing the sterile sediments and non-sterile sediments, respectively. The results are comparable with those obtained in the microcosms in a greenhouse where only the endogenous microflora were used. The results of this study show that mangrove sediment contains an active microflora that can metabolize diesel. Indigenous and active microflora show an interesting potential for diesel degradation. [less ▲]

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See detailComprehensive comparison of the chemical and structural characterization of landfill leachate and leonardite humic fractions
Tahiri, Abdelghani ULg; Richel, Aurore ULg; Destain, Jacqueline ULg et al

in Analytical and Bioanalytical Chemistry (2016), 408(7), 1917-1928

Humic substances (HS) are complex and heterogeneous mixtures of organic compounds that occur everywhere in the environment. They represent most of the dissolved organic matter in soils, sediments (fossil ... [more ▼]

Humic substances (HS) are complex and heterogeneous mixtures of organic compounds that occur everywhere in the environment. They represent most of the dissolved organic matter in soils, sediments (fossil), water, and landfills. The exact structure of HS macromolecules has not yet been determined because of their complexity and heterogeneity. Various descriptions of HS are used depending on specific environments of origin and research interests. In order to improve the understanding of the structure of HS extracted from landfill leachate (LHS) and commercial HS from leonardite (HHS), this study sought to compare the composition and characterization of the structure of LHS and HHS using elemental composition, chromatographic (high-performance liquid chromatography (HPLC)), and spectroscopic techniques (UV–vis, FTIR, NMR, and MALDI-TOF). The results showed that LHS molecules have a lower molecular weight and less aromatic structure than HHS molecules. The characteristics of functional groups of both LHS and HHS, however, were basically similar, but there was some differences in absorbance intensity. There were also less aliphatic and acidic functional groups and more aromatic and polyphenolic compounds in the humic acid (HA) fraction than in the fulvic acid (FA) and other molecules (OM) fractions of both origins. The differences between LHS and HHS might be due to the time course of humification. Combining the results obtained from these analytical techniques cold improve our understanding of the structure of HS of different origins and thus enhance their potential use. [less ▲]

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See detailRole of phenazines and cyclic lipopeptides produced by pseudomonas sp. CMR12a in induced systemic resistance on rice and bean
Ma, Z.; Hua, G. K. H.; Ongena, Marc ULg et al

in Environmental Microbiology Reports (2016)

Pseudomonas sp. CMR12a produces two different classes of cyclic lipopeptides (CLPs) (orfamides and sessilins), which all play a role in direct antagonism against soilborne pathogens. Here we show that ... [more ▼]

Pseudomonas sp. CMR12a produces two different classes of cyclic lipopeptides (CLPs) (orfamides and sessilins), which all play a role in direct antagonism against soilborne pathogens. Here we show that Pseudomonas sp. CMR12a is also able to induce systemic resistance to Magnaporthe oryzae on rice and to the web blight pathogen Rhizoctonia solani AG2-2 on bean. Plant assays with biosynthesis mutants of Pseudomonas sp. CMR12a impaired in the production of phenazines and/or CLPs and purified metabolites revealed that distinct bacterial determinants are responsible for inducing systemic resistance in these two pathosystems. In rice, mutants impaired in phenazine production completely lost their ability to induce systemic resistance, while a soil drench with pure phenazine-1-carboxamide (PCN) at a concentration of 0.1 or 1 μM was active in inducing resistance against M. oryzae. In bean, mutants that only produced phenazines, sessilins or orfamides were still able to induce systemic resistance against Rhizoctonia web blight, but a balanced production of these metabolites was needed. This study not only shows that Pseudomonas sp. CMR12a can protect rice to blast disease and bean to web blight disease, but also displays that the determinants involved in induced systemic resistance are plant, pathogen and concentration dependent. © 2016 Society for Applied Microbiology and John Wiley & Sons Ltd. [less ▲]

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See detailComplete genome sequence of Bacillus amyloliquefaciens subsp. plantarum S499, a rhizobacterium that triggers plant defences and inhibits fungal phytopathogens
Molinatto, G.; Puopolo, G.; Sonego, P. et al

in Journal of Biotechnology (2016), 238

Bacillus amyloliquefaciens subsp. plantarum S499 is a plant beneficial rhizobacterium with a good antagonistic potential against phytopathogens through the release of active secondary metabolites ... [more ▼]

Bacillus amyloliquefaciens subsp. plantarum S499 is a plant beneficial rhizobacterium with a good antagonistic potential against phytopathogens through the release of active secondary metabolites. Moreover, it can induce systemic resistance in plants by producing considerable amounts of surfactins. The complete genome sequence of B. amyloliquefaciens subsp. plantarum S499 includes a circular chromosome of 3,927,922 bp and a plasmid of 8,008 bp. A remarkable abundance in genomic regions of putative horizontal origin emerged from the analysis. Furthermore, we highlighted the presence of genes involved in the establishment of interactions with the host plants at the root level and in the competition with other soil-borne microorganisms. More specifically, genes related to the synthesis of amylolysin, amylocyclicin, and butirosin were identified. These antimicrobials were not known before to be part of the antibiotic arsenal of the strain. The information embedded in the genome will support the upcoming studies regarding the application of B. amyloliquefaciens isolates as plant-growth promoters and biocontrol agents. © 2016 Elsevier B.V. [less ▲]

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See detailPyoverdine and histicorrugatin-mediated iron acquisition in Pseudomonas thivervalensis
Matthijs, Sandra; Brandt, Nathalie; Ongena, Marc ULg et al

in Biometals (2016), 29(3), 467-485

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See detailIn Situ Analysis of Bacterial Lipopeptide Antibiotics by Matrix-Assisted Laser Desorption/Ionization Mass Spectrometry Imaging
Debois, Delphine ULg; Ongena, Marc ULg; Cawoy, H. et al

in Nonribosomal Peptide and Polyketide Biosynthesis : Methods and Protocols (2016)

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See detailBiosynthesis, Chemical Structure, and Structure-Activity Relationship of Orfamide Lipopeptides Produced by Pseudomonas protegens and Related Species
Ma, Zongwang; Geudens, Niels; Kieu, Nam P. et al

in Frontiers in Microbiology (2016), 7

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