References of "Massart, Sébastien"
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See detailCOST Action FA1407: Empowering NGS technologie for study and diagnostic of plant viruses
Massart, Sébastien ULg; Petter, François

Conference (2016, July)

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See detailSerious Game Biotechnologie: dans la peau d'un responsable de laboratoire de diagnostic
Massart, Sébastien ULg

Scientific conference (2016, June 17)

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See detailTERRA Innovation Fair: Thematic 4: Innovations in PLant Protection
Massart, Sébastien ULg

Conference (2016, May 20)

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See detailInsights gained from metagenomic sequencing of apple fruit surface (cv. Pinova)
Angeli, Dario; Massart, Sébastien ULg; Sare, Abdoul Razack ULg et al

Poster (2016, May 17)

Plant microbial communities (microbiota) living at the surface of fruit have been the source of the majority of biocontrol agents (BCAs). Despite this interest, their role as a community has been poorly ... [more ▼]

Plant microbial communities (microbiota) living at the surface of fruit have been the source of the majority of biocontrol agents (BCAs). Despite this interest, their role as a community has been poorly studied so far. They holistic study was an unattainable objective due to the absence of techniques to survey microbial communities and their evolution. The recent developments in high-throughput sequencing (HTS) have now enabled the holistic analysis of the microbiota genomes. A pioneering assay has been carried out to get insight into the microbiota of apple surface through metagenome sequencing. Apple from Pinova cultivar have been sampled in orchard and the microbiota isolated. After DNA extraction, the HTS assay generated 14.5 Gbases which were assembled in 133,888 contigs. These contigs provided useful information on taxonomic composition of the microbiota. A total of 1398 bacterial species and 397 fungal species have been identified. Among them, 22 species corresponded to known apple pathogens (Penicillium expansum, Penicillium spp, Botrytis cinerea, Monilinia fructicola, Nectria haematococca, Glomerella cingulate, G. graminicola, Alternaria alternate, Alternaria brassicicola, A. citri, A. longipes, A. solani, A. tenuissima, Fusarium solani, F. oxysporum, F. culmorum, F. lateritium, Mucor circinelloides, M. hiemalis, F. racemosus, Venturia inaequalis, Cladosporium cladosporioides). In addition, several contigs were assigned to species or genus of known BCA strains like Pichia canadensis, Bacillus sp., Debaryomyces hansenii, Aureobasidium pullulans and Pantoea vagans. These results will be discussed. In any case, these results underline a very diverse microbial community whose role needs to be characterized. In this line, the functional analysis (gene function determination) of the contigs is ongoing. [less ▲]

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See detailCharacterization and biocontrol properties of Lactuca sativa rhizosphere microbiota in an aquaponic system
Stouvenakers, Gilles ULg; Massart, Sébastien ULg; Jijakli, Haissam ULg

Poster (2016, May 17)

Aquaponics is an integrated recirculated system that combines aquaculture and hydroponic plant production. The dissolved nutrients generated by the fish rearing after bacterial activities are used by the ... [more ▼]

Aquaponics is an integrated recirculated system that combines aquaculture and hydroponic plant production. The dissolved nutrients generated by the fish rearing after bacterial activities are used by the plants for their growth. This uptake reduces the accumulation of some molecules which allow a longer water recirculation. When comparing growth conditions between aquaponics and hydroponics, we observed much lower concentration of several key nutrients in aquaponics. Nevertheless, several experimentations report similar or better yield in aquaponics compared with hydroponics. One explanation of this phenomenon could be linked to microbial actions. Nowadays, microorganisms related to aquaculture and hydroponics are well characterized but very little is known about the microbiota associated with aquaponic system. The first aim of this study is to characterize the rhizosphere microbiota (metagenomics) of lettuces growing in an aquaponics system. A NGS approach targeting the 16S rDNA will be carried out to evaluate the bacterial composition and diversity. The second aim is to assess the resistance of aquaponics lettuces following a pest introduction. Yields, symptoms and microbial changes due to the pest will be recorded and analysed to determine if aquaponics systems provide a better plant protection than hydroponics. Depending on the results, the final steps will be to identify the optimal conditions for the management of the potential beneficial microbiota or isolate a beneficial microorganism. [less ▲]

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See detailA "external" StandPoint on QMS
Massart, Sébastien ULg

Conference (2016, March)

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See detailVolatile Organic Compounds:a new tool to control barley pathogens?
Kaddes, Amine ULg; Massart, Sébastien ULg; Fauconnier, Marie-Laure ULg et al

Poster (2016, February 05)

Barley is threatened by various edaphic fungal diseases. In particular, common root rot caused by Fusarium culmorum and Cochliobolus sativus is causing between 9 and 23 % of yield losses. Today, since ... [more ▼]

Barley is threatened by various edaphic fungal diseases. In particular, common root rot caused by Fusarium culmorum and Cochliobolus sativus is causing between 9 and 23 % of yield losses. Today, since most of the chemicals used for crop protection are being forbidden, there is a growing need of sustainable ways to control these diseases. A recent study has shown that barley roots infected by common root rot emitted 23 Volatile Organic Compounds (VOCs) that were not emitted by healthy barley roots. In addition it was shown that the blend of these molecules negatively impacted the growth of the two fungi. The main objective of the present study was to determine which VOCs of the blend were the most efficient in this growth reduction, and to understand their mode of action. We have found that methyl propionate (MP) and methyl acrylate (MA) reduced significantly the development of the two fungi in vitro. We also observed an inhibition of the spores’ germination in the presence of the two esters. The effect of the two molecules on infected barley seeds was also tested. We have observed that the plants coming from the seeds in contact with the VOCs did not develop symptoms of the disease. The antifungal and antibacterial activity of these VOCs on a wider range of fungal and bacterial diseases was also tested in vitro with success The two esters that we have studied could thus be an interesting starting point in the development of a sustainable way to control barley’s diseases. [less ▲]

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See detailEarly life programming of pigs' intestinal microbiota, intestinal functioning and hepatic metabolism by maternal wheat bran supplementation
Leblois, Julie ULg; Bindelle, Jérôme ULg; Dehareng, Frédéric et al

Poster (2016, February 05)

The gastrointestinal (GI) microbiota plays many roles on the host’s health, acting as a barrier against pathogens and influencing the development and maturation of the mucosa, important for host’s ... [more ▼]

The gastrointestinal (GI) microbiota plays many roles on the host’s health, acting as a barrier against pathogens and influencing the development and maturation of the mucosa, important for host’s immunity. Microbial colonization occurs pre- and postnatally, via maternal transfer i.e. by milk and by the contact with sows faeces. Hence, the early establishment of a beneficial gastrointestinal microbiota in piglets was investigated by supplementing the sows with wheat bran that we consider as a prebiotic (rich in non-starch polysaccharides). Sows were fed either a wheat bran-enriched diet (25% in gestation, 14% in lactation) either a control diet. Piglets were suckling during 4 weeks, receiving a standard creep feed containing no pre- or probiotic from the second week until weaning. The direct effect of wheat bran on the fecal microbial composition of the sow has been analyzed as well as the chemical composition and immunoglobulins content of the colostrum and milk. Sows and piglets growth performances have been recorded at different time points to verify that wheat bran doesn’t impair performances. At weaning, piglets have been euthanized and the impact of the maternal treatment was investigated at different levels: growth performances, ileal and colonic microbiota, intestinal physiology and immunological response and metabolism. A second animal experiment will be performed next year including a metabolic challenge by giving half of the piglets a high-energy diet post-weaning. [less ▲]

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See detailA metagenomic approach from aphid’s hemolymph sheds light on the potential roles of co-existing endosymbionts
De Clerck, Caroline ULg; Fujiwara, Akiko; Joncour, Pauline et al

in Microbiome (2015), 3(63),

Background: Aphids are known to live in symbiosis with specific bacteria, called endosymbionts which can be classified as obligate or accessory. Buchnera aphidicola is generally the only obligatory ... [more ▼]

Background: Aphids are known to live in symbiosis with specific bacteria, called endosymbionts which can be classified as obligate or accessory. Buchnera aphidicola is generally the only obligatory symbiont present in aphids, supplying essential nutrients that are missing in the plants phloem to its host. Pentalonia nigronervosa is the main vector of the banana bunchy top virus, one of the most damageable viruses in banana. This aphid is carrying two symbionts: B. aphidicola (BPn) and Wolbachia sp. (wPn). The high occurrence of Wolbachia in the banana aphid raises questions about the role it plays in this insect. The goal of this study was to go further in the understanding of the role played by the two symbionts in P. nigronervosa. To do so, microinjection tests were made to see the effect of wPn elimination on the host, and then, high-throughput sequencing of the haemolymph was used to analyze the gene content of the symbionts. Results: We observed that the elimination of wPn systematically led to the death of aphids, suggesting that the bacterium could play a mutualistic role. In addition, we identify and annotate 587 and 250 genes for wPn and BPn, respectively, through high-throughput sequencing. Analysis of these genes suggests that the two bacteria are working together for the production of several essential nutrients. The most striking cases are for lysin and riboflavin which are usually provided by B. aphidicola alone to the host. In the banana aphid, the genes involved in the production pathways of these metabolites are shared between the two bacteria making them both essential for the survival of the aphid host. Conclusions: Our results suggest that a co-obligatory symbiosis between B. aphidicola and Wolbachia occurs in the banana aphid, the two bacteria acting together to supply essential nutrients to the host. This is, to our knowledge, the first time Wolbachia is reported to play an essential role in aphids. [less ▲]

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See detailSequencage haut-debit et virologie. Le tsunami R&D et son impact pour le diagnostic futur des virus
Massart, Sébastien ULg

Scientific conference (2015, November 27)

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See detailPractical training session on virus discovery from High Throughput Sequencing data
Massart, Sébastien ULg

Conference (2015, September 09)

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See detailEffect of Volatile Organic Compounds against fungal and bacterial plant pathogens
Kaddes, Amine ULg; Massart, Sébastien ULg; Fauconnier, Marie-Laure ULg et al

Scientific conference (2015, August 25)

Barley is threatened by various edaphic fungal diseases. Common root rot, caused by Fusarium culmorum and Cochliobolus sativus , is one of the major fungal diseases of barley, causing between 9 and 23 ... [more ▼]

Barley is threatened by various edaphic fungal diseases. Common root rot, caused by Fusarium culmorum and Cochliobolus sativus , is one of the major fungal diseases of barley, causing between 9 and 23 % of yield losses. Since several chemicals used for crop protection are being forbidden, new ways of protection are needed. In a previous study, we have shown that barley roots infected by common root rot emitted 23 Volatile Organic Compounds (VOCs) that were not emitted by healthy barley roots. Among VOCs methyl propionate and methyl acrylate applied alone reduced significantly the development of both barley pathogens. The main objective of this study is to evaluate the antifungal and antibacterial activity of both VOCs on a wider range of plant pathogens: Fusarium culmorum , Fusarium graminiurum, Penicillium expansum, Penicilium digitatum and Penicilium itallicum as fungal pathogens ) and Pectobacterium carotovorum carotovorum and Pectobacterium atrosepticum as bacterial pathogens. The evaluation has been made through ELISA microplates with PDB or V8 media. The growth of the pathogen (bacteria and conidia) in the presence of the VOCs was evaluated and compared to a control (same media without VOCs). Methylpropionate showed interesting antibacterial activity with 40% and 96%of inhibition against Pectobacterium carotovorum carotovorum and Pectobacterium atrosepticum, respectively. An inhibition of 77 and 97 % was observed in presence of methylacrylate against Pectobacterium carotovorum carotovorum and Pectobacterium atrosepticum, respectively. Concerning antifungal activity, the results showed that the methyl acrylate inhibted the growth of all tested fungi (the least was P.digitatum by 70%), similarly to methylpropionate (with 50% found in F.culmorum). [less ▲]

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See detailApplication of next generation sequencing for study and diagnosis of plant viral diseases in agriculture
van der Vlugt, René; Minafra, Angelanotio; Olmos, Antonio et al

Poster (2015, August)

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