Optimal design for nonlinear estimation of the hemodynamic response function.
Maus, Bärbel ; ; et al
in Human Brain Mapping (2012), 33(6), 1253-1267
Subject-specific hemodynamic response functions (HRFs) have been recommended to capture variation in the form of the hemodynamic response between subjects (Aguirre et al., : Neuroimage 8:360–369 ... [more ▼]
Subject-specific hemodynamic response functions (HRFs) have been recommended to capture variation in the form of the hemodynamic response between subjects (Aguirre et al., : Neuroimage 8:360–369). The purpose of this article is to find optimal designs for estimation of subject-specific parameters for the double gamma HRF. As the double gamma function is a nonlinear function of its parameters, optimal design theory for nonlinear models is employed in this article. The double gamma function is linearized by a Taylor approximation and the maximin criterion is used to handle dependency of the D-optimal design on the expansion point of the Taylor approximation. A realistic range of double gamma HRF parameters is used for the expansion point of the Taylor approximation. Furthermore, a genetic algorithm (GA) (Kao et al., : Neuroimage 44:849–856) is applied to find locally optimal designs for the different expansion points and the maximin design chosen from the locally optimal designs is compared to maximin designs obtained by m-sequences, blocked designs, designs with constant interstimulus interval (ISI) and random event-related designs. The maximin design obtained by the GA is most efficient. Random event-related designs chosen from several generated designs and m-sequences have a high efficiency, while blocked designs and designs with a constant ISI have a low efficiency compared to the maximin GA design. [less ▲]Detailed reference viewed: 16 (7 ULg)
Optimal design of multi-subject blocked fMRI experiments.
Maus, Bärbel ; ; et al
in NeuroImage (2011), 56(3), 1338-1352
The design of a multi-subject fMRI experiment needs specification of the number of subjects and scanning time per subject. For example, for a blocked design with conditions A or B, fixed block length and ... [more ▼]
The design of a multi-subject fMRI experiment needs specification of the number of subjects and scanning time per subject. For example, for a blocked design with conditions A or B, fixed block length and block order ABN, where N denotes a null block, the optimal number of cycles of ABN and the optimal number of subjects have to be determined. This paper presents a method to determine the optimal number of subjects and optimal number of cycles for a blocked design based on the A-optimality criterion and a linear cost function by which the number of cycles and the number of subjects are restricted. Estimation of individual stimulus effects and estimation of contrasts between stimulus effects are both considered. The mixed-effects model is applied and analytical results for the A-optimal number of subjects and A-optimal number of cycles are obtained under the assumption of uncorrelated errors. For correlated errors with a first-order autoregressive (AR1) error structure, numerical results are presented. Our results show how the optimal number of cycles and subjects depend on the within- to between-subject variance ratio. Our method is a new approach to determine the optimal scanning time and optimal number of subjects for a multi-subject fMRI experiment. In contrast to previous results based on power analyses, the optimal number of cycles and subjects can be described analytically and costs are considered. [less ▲]Detailed reference viewed: 53 (10 ULg)
Robustness of optimal design of fMRI experiments with application of a genetic algorithm.
Maus, Bärbel ; ; et al
in NeuroImage (2010), 49(3), 2433-2443
In this paper we apply the genetic algorithm developed by Kao et al. (2009) to find designs which are robust against misspecification of the error autocorrelation. Two common optimality criteria, the A ... [more ▼]
In this paper we apply the genetic algorithm developed by Kao et al. (2009) to find designs which are robust against misspecification of the error autocorrelation. Two common optimality criteria, the A-optimality criterion and the D-optimality criterion, based upon a general linear model are employed to obtain locally optimal designs for a given value of the autocorrelation. The maximin criterion is then used to obtain designs which are robust against misspecification of the autocorrelation. Furthermore, robustness depending on the choice of optimality criterion is evaluated. We show analytically and empirically that the A- and D-optimality criterion will result in different optimal designs, e.g. with different stimulus frequencies. Optimal stimulus frequency for the A-optimality criterion has been derived by Liu et al. (2004) whereas we derive here the optimal stimulus frequency for the D-optimality criterion. Conclusions about the robustness of an optimal design against misspecification of model parameters and choice of optimality criterion are drawn based upon our results. [less ▲]Detailed reference viewed: 11 (3 ULg)
Another kind of 'BOLD Response': answering multiple-choice questions via online decoded single-trial brain signals.
; ; et al
in Progress in Brain Research (2009), 177
The term 'locked-in'syndrome (LIS) describes a medical condition in which persons concerned are severely paralyzed and at the same time fully conscious and awake. The resulting anarthria makes it ... [more ▼]
The term 'locked-in'syndrome (LIS) describes a medical condition in which persons concerned are severely paralyzed and at the same time fully conscious and awake. The resulting anarthria makes it impossible for these patients to naturally communicate, which results in diagnostic as well as serious practical and ethical problems. Therefore, developing alternative, muscle-independent communication means is of prime importance. Such communication means can be realized via brain-computer interfaces (BCIs) circumventing the muscular system by using brain signals associated with preserved cognitive, sensory, and emotional brain functions. Primarily, BCIs based on electrophysiological measures have been developed and applied with remarkable success. Recently, also blood flow-based neuroimaging methods, such as functional magnetic resonance imaging (fMRI) and functional near-infrared spectroscopy (fNIRS), have been explored in this context. After reviewing recent literature on the development of especially hemodynamically based BCIs, we introduce a highly reliable and easy-to-apply communication procedure that enables untrained participants to motor-independently and relatively effortlessly answer multiple-choice questions based on intentionally generated single-trial fMRI signals that can be decoded online. Our technique takes advantage of the participants' capability to voluntarily influence certain spatio-temporal aspects of the blood oxygenation level-dependent (BOLD) signal: source location (by using different mental tasks), signal onset and offset. We show that healthy participants are capable of hemodynamically encoding at least four distinct information units on a single-trial level without extensive pretraining and with little effort. Moreover, real-time data analysis based on simple multi-filter correlations allows for automated answer decoding with a high accuracy (94.9%) demonstrating the robustness of the presented method. Following our 'proof of concept', the next step will involve clinical trials with LIS patients, undertaken in close collaboration with their relatives and caretakers in order to elaborate individually tailored communication protocols. As our procedure can be easily transferred to MRI-equipped clinical sites, it may constitute a simple and effective possibility for online detection of residual consciousness and for LIS patients to communicate basic thoughts and needs in case no other alternative communication means are available (yet)--especially in the acute phase of the LIS. Future research may focus on further increasing the efficiency and accuracy of fMRI-based BCIs by implementing sophisticated data analysis methods (e.g., multivariate and independent component analysis) and neurofeedback training techniques. Finally, the presented BCI approach could be transferred to portable fNIRS systems as only this would enable hemodynamically based communication in daily life situations. [less ▲]Detailed reference viewed: 82 (3 ULg)