Mutational Analysis Of The Tre2 Oncogene Encoding An Inactive Rabgap; Thomas, Annick ; Brasseur, Robert et alin Biotechnology Letters (2007), 29(12), 1927-37 The TRE2 oncoprotein is structurally related to the RabGAP (GTPase-activating protein) family. However, TRE2 seems enzymatically inactive. Two regions are important for its lack of GAP activity. First ... [more ▼] The TRE2 oncoprotein is structurally related to the RabGAP (GTPase-activating protein) family. However, TRE2 seems enzymatically inactive. Two regions are important for its lack of GAP activity. First, the TBC domain, forming the catalytically active domain of RabGAPs, is non-functional in the oncoprotein. Also involved in TRE2 inactivity is the 93-aa region flanking the TBC domain on the C-terminal side. In order to identify the residues responsible for non-functionality, we performed hydrophobic cluster analysis of the oncoprotein sequence, combined with secondary structure prediction, receptor-binding domain analysis, and a tilted peptide calculation. These analyses were complemented with site-directed and random mutagenesis experiments. On the basis of our data, we hypothesize that the lack of secondary structure of the region flanking the TBC domain in TRE2 may explain why this region plays a role in the lack of GAP activity, even when a potentially functional TBC domain is present. [less ▲] Detailed reference viewed: 7 (1 ULg) Molecular cloning and functional expression of a new aphid isoprenyl diphosphate synthaseVandermoten, Sophie ; ; et alPoster (2006, December 18) Detailed reference viewed: 7 (1 ULg) Molecular cloning and functional expression of a new aphid isoprenyl diphosphate synthaseVandermoten, Sophie ; ; et alin Archives Internationales de Physiologie et de Biochimie (2006, December), 190 Detailed reference viewed: 17 (11 ULg) Etude moléculaire de la structure et de la fonction du produit de l'oncogène Tre2, homologue à deux protéines Ypt/Rab GAPs levuriennes, et impliqué dans différentes tumeurs humaines incluant le sarcome d'Ewing; ; Stroobants, Aurore et alPoster (2006) Detailed reference viewed: 25 (4 ULg) Effets pré- et/ou probiotiques de levure métabolisant des ions minéraux sur les performances et fonctions immunesPortetelle, Daniel ; Vandenbol, Micheline ; Renaville, Robert ![]() Report (2006) Detailed reference viewed: 6 (2 ULg) Quantification of Bifidobacterium spp. and Lactobacillus spp. in rat fecal samples by real-time PCR.; ; et al in Microbiological research (2006), (5), Detailed reference viewed: 54 (4 ULg) The Tre2 Oncoprotein, Implicated In Ewing'S Sarcoma, Interacts With Two Components Of The Cytoskeleton; ; Portetelle, Daniel et alin Biotechnology Letters (2006), 28(4), Detailed reference viewed: 11 (3 ULg) Identification of sequences responsible of lost of activity of the Tre2 oncogene product by functional complementation of the yeast msb3msb4 mutant; Portetelle, Daniel ; Vandenbol, Micheline ![]() Poster (2005) Detailed reference viewed: 2 (1 ULg) Etude fonctionnelle et structurale du produit de l'oncogène humain oncTre210, homologue à deux protéines RabGAP levuriennes, impliqué dans différentes tumeurs humaines incluant le Sarcome d'Ewing; ; Portetelle, Daniel et alPoster (2005) Detailed reference viewed: 7 (2 ULg) Expression and purification of the human Tre2 product, a putative Ypt/Rab GTPase activating protein.; Stroobants, Aurore ; et alin Archives Internationales de Physiologie et de Biochimie (2005), 191 Detailed reference viewed: 13 (6 ULg) Quantification of Bifidobacterium ssp and Lactobacillus spp in rat fecal samples by real-time PCR; ; et al in Archives Internationales de Physiologie et de Biochimie (2005), 191 Detailed reference viewed: 17 (3 ULg) Identification of sequences responsible for lost of activity of the Tre2 oncogene product by functional complementation of the yeast msb3msb4 mutant; Portetelle, Daniel ; Vandenbol, Micheline ![]() in Yeast (Chichester, England) (2005), 22(S1), 155 Detailed reference viewed: 13 (6 ULg) Expression of a synthetic gene encoding a Tribolium castaneum carboxylesterase in Pichia pastoris; ; et al in Protein Expression & Purification (2005), 42(2), 286-294 Detailed reference viewed: 19 (3 ULg) Estimation of bioreactor efficiency through structured hydrodynamic modeling case study of a Pichia pastoris fed-batch process.Delvigne, Frank ; El Mejdoub, Thami ; Destain, Jacqueline et alin Applied Biochemistry and Biotechnology (2005), 121-124 In this article, two theories are unified to investigate the effect of hydrodynamics on a specific bioprocess: the network-of-zones (NOZ) hydrodynamic structured modeling approach (developed by several ... [more ▼] In this article, two theories are unified to investigate the effect of hydrodynamics on a specific bioprocess: the network-of-zones (NOZ) hydrodynamic structured modeling approach (developed by several researchers but applied to only a few bioprocesses) and the effectiveness factor eta approach. Two process scales were investigated (20 and 500 L), and for each, hydrodynamics were quantified using an NOZ validated by homogeneity time measurements. Several impeller combinations inducing quite different hydrodynamics were tested at the 20-L scale. After this step, effectiveness factors were determined for each fermentation run. To achieve this, a perfectly mixed microbial kinetic model was evaluated by using simple Monod kinetics with a fed-batch mass balance. This methodology permitted determination of the effectiveness factor with more accuracy because of the relation with the perfect case deduced from the Monod kinetics. It appeared that for the small scale, eta decreased until reaching a value of approx 0.7 (30% from the ideal case) for the three impeller systems investigated. However, stirring systems that include hydrofoils seemed to maintain higher effectiveness factors during the course of the fermentation. This effect can be attributed to oxygen transfer performance or to homogenization efficiency exhibited by the hydrofoils. To distinguish the oxygen transfer from the homogenization component of the effectiveness factor, these phenomena were analyzed separately. After determining the evolution of etaO2 linked to oxygen transfer for each of the fermentation runs, the NOZ model was employed to quantify substrate gradient appearance. After this step, another effectiveness factor, etamix, related to mixing was defined. Consequently, it is possible to distinguish the relative importance of the mixing effect and oxygen transfer on a given bioprocess. The results have highlighted an important scale effect on the bioprocess that can be analyzed using the NOZ model. [less ▲] Detailed reference viewed: 38 (4 ULg) Genetic Characterization Of The Yeast Pichia Anomala (Strain K), An Antagonist Of Postharvest Diseases Of Apple; Vandenbol, Micheline ; Jijakli, Mohamed ![]() in Journal of Applied Microbiology (2005), 98(3), Detailed reference viewed: 24 (2 ULg) At Least Two Regions Of The Oncoprotein Tre2 Are Involved In Its Lack Of Gap Activity; Vandenbol, Micheline ![]() in Biochemical and Biophysical Research Communications (2005), 335(3), Detailed reference viewed: 10 (3 ULg) Multicopy Suppression Screen In The Msb3 Msb4 Saccharomyces Cerevisiae Double Mutant, Affected In Ypt/Rabgap Activity; Portetelle, Daniel ; Vandenbol, Micheline ![]() in Biotechnology Letters (2005), 27(19), Detailed reference viewed: 7 (2 ULg) Implication of two genes coding for exo-ß-1,3-glucanase in the biocontrol activity of Pichia anomala (strain K) against on post-harvest apples; ; Vandenbol, Micheline et alConference (2005) Detailed reference viewed: 8 (0 ULg) Molecular study of biocontrol properties of Pichia anomala (strain K), antagonist against Botrytis cinerea on postharvest applesMassart, Sébastien ; ; Vandenbol, Micheline et alPoster (2004) Detailed reference viewed: 17 (3 ULg) Development of a gene targeting technique based on URA3-blaster on P. anomalata (strain K); Vandenbol, Micheline ; Jijakli, Mohamed ![]() Poster (2004) Detailed reference viewed: 15 (2 ULg) |
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