Stochastic modelling of micro-organisms displacements in a stirred-tank bioreactorDelafosse, Angélique ; Delvigne, Frank ; Collignon, Marie-Laure et alPoster (2010) Detailed reference viewed: 29 (15 ULg) L'extrapolation des bioréacteurs : un problème de génie des procédés ou de physiologie microbienne ?Delvigne, Frank ; Destain, Jacqueline ; Brognaux, Alison et alin Chimie Nouvelle (2010), 104 Bioreactor scale-up often pose a serious issue during the industrial development of a bioprocess considering the numerous physical and biological phenomena occurring in the reacting volume. The basic ... [more ▼] Bioreactor scale-up often pose a serious issue during the industrial development of a bioprocess considering the numerous physical and biological phenomena occurring in the reacting volume. The basic principles of scale-up coming from the traditional chemical and process engineering approaches will be first reviewed and will be then compared to a new one involving recent development at the level of microbial strain manipulation. This "physiological" approach of scale-up involves directly a biological component of the system (by comparison with the traditional approach for scaling-up involving physical parameters indirectly linked to the physiological phenomena occurring in the bioreactor), i.e. the synthesis of a reporter fluorescent protein when microbial cells are exposed to stress. It will be shown how this principle can be used for a better understanding of the relationship between bioreactor hydrodynamics and microbial stress. [less ▲] Detailed reference viewed: 134 (40 ULg) An Improved Test to Study the Changes in Membrane Permeability During Rehydration of Freeze-Dried Weissella paramesenteroides LC11; ; Thonart, Philippe ![]() in The Open Biotechnology Journal (2010), 4 The objective of this study was to assess changes in membrane permeability during rehydration of freeze-dried Weissella paramesenteroides LC11. Viability was assessed using the electrical conductivity ... [more ▼] The objective of this study was to assess changes in membrane permeability during rehydration of freeze-dried Weissella paramesenteroides LC11. Viability was assessed using the electrical conductivity measurement (ms cm-1 g-1 dry weight) and the plate count method (cfu g-1 dry weight). The symptoms of injury included an increase in the electrolyte leakage during the first 4 h of rehydration in Milli Q water and a decrease in the survival rate (about 64%), suggesting an increase in membrane permeability during dehydration. During rehydration of the freeze-dried strain, an increase in the temperature, NaCl or monosodium glutamate concentration and a decrease in H+ concentration resulted in an increase in the electrolyte leakage and a decrease in the survival rate (from about 5% to 97%, with respect to the treatment made). However, a decrease in the electrolyte leakage was observed with increasing glycerol, sucrose or maltodextrin and resulted in the maintenance of cell viability. Change in membrane permeability might lead to electrolyte leakage during rehydration and, ultimately, cell death. The electrolyte leakage assay associated with the plate count method, a quick and inexpensive method, could be used to evaluate dried bacteria resistance to dehydration. [less ▲] Detailed reference viewed: 34 (5 ULg) Plasmid-associated bacteriocin production by Lactobacillus LMG21688 Listeria monocytogenes growth rebound in a food system.; ; Dubois Dauphin, Robin et alin FEMS Microbiology Letters (2010), 306(1), 37-44 Detailed reference viewed: 37 (17 ULg) Influence of bioreactor hydraulic characteristics on a Saccharomyces cerevisiae fed-batch culture: hydrodynamic modelling and scale-down investigations.Lejeune, Annick ; Delvigne, Frank ; Thonart, Philippe ![]() in Journal of Industrial Microbiology & Biotechnology (2010), 37 Yeast is a widely used microorganism at the industrial level because of its biomass and metabolite production capabilities. However, due to its sensitivity to the glucose effect, problems occur during ... [more ▼] Yeast is a widely used microorganism at the industrial level because of its biomass and metabolite production capabilities. However, due to its sensitivity to the glucose effect, problems occur during scale-up to the industrial scale. Hydrodynamic conditions are not ideal in large-scale bioreactors, and glucose concentration gradients can arise when these bioreactors are operating in fed-batch mode. We have studied the effects of such gradients in a scale-down reactor, which consists of a mixed part linked to a non-mixed part by a recirculation pump, in order to mimic the hydrodynamic conditions encountered at the large scale. During the fermentation tests in the scale-down reactor, there was a drop in both biomass yield (ratio between the biomass produced and the glucose added) and trehalose production and an increase in both fermentation time (time between inoculation and beginning of stationary phase) and ethanol production. We have developed a stochastic model which explains these effects as the result of an induction process determined mainly by the hydrodynamic conditions. The concentration profiles experienced by the microorganisms during the scale-down tests were expressed and linked to the biomass yields of the scale-down tests. [less ▲] Detailed reference viewed: 73 (39 ULg) Development of a compartment model based on CFD simulations for mixing description in bioreactorsDelafosse, Angélique ; Delvigne, Frank ; Collignon, Marie-Laure et alin Biotechnologie, Agronomie, Société et Environnement = Biotechnology, Agronomy, Society and Environment [=BASE] (2010), 14(2), 517-522 Understanding and modelling the complex interactions between biological reaction and hydrodynamics is a key problem when dealing with bioprocesses. It is fundamental to be able to accurately predict the ... [more ▼] Understanding and modelling the complex interactions between biological reaction and hydrodynamics is a key problem when dealing with bioprocesses. It is fundamental to be able to accurately predict the hydrodynamics behaviour of bioreactors of different size and its interaction with the biological reaction. CFD can provide detailed modelling about hydrodynamics and mixing. However, it is computationally intensive, especially when reactions are taken into account. Another way to predict hydrodynamics is the use of "Compartment" or "Multi-zone" model which are much less demanding in computation time than CFD. However, compartments and fluxes between them are often defined by considering global quantities not representative of the flow. To overcome the limitations of these two methods, a solution is to combine compartment modelling and CFD simulations. Therefore, the aim of this study is to develop a methodology in order to propose a compartment model based on CFD simulations of a bioreactor. The flow rate between two compartments can be easily computed from the velocity fields obtained by CFD. The difficulty lies in the definition of the zones in such a way they can be considered as perfectly mixed. The creation of the model compartments from CFD cells can be achieved manually or automatically. The manual zoning consists in aggregating CFD cells according to the user's wish. The automatic zoning defines compartments as regions within which the value of one or several properties are uniform with respect to a given tolerance. Both manual and automatic zoning methods have been developed and compared by simulating the mixing of an inert scalar. For the automatic zoning, several algorithms and different flow properties have been tested as criteria for the compartment creation. [less ▲] Detailed reference viewed: 82 (30 ULg) Trehalose as a stress marker of the physiological impact of mixing on yeast production: scale-down reactors and mini-bioreactors investigationsLejeune, Annick ; Delvigne, Frank ; Thonart, Philippe ![]() in Biotechnologie, Agronomie, Société et Environnement = Biotechnology, Agronomy, Society and Environment [=BASE] (2010), 14 Detailed reference viewed: 24 (7 ULg) Impact of scaled-down dissolved oxygen fluctuations at different levels of the lipase synthesis pathway of Yarrowia lipolyticaKar, Tambi ; Destain, Jacqueline ; Thonart, Philippe et alin Biotechnologie, Agronomie, Société et Environnement = Biotechnology, Agronomy, Society and Environment [=BASE] (2010), 14 Detailed reference viewed: 30 (12 ULg) Optimisation of culture conditions for biological hydrogen production by Citrobacter freundii CWBI952 in batch, sequenced-batch and semicontinuous operating modeHamilton, Christopher ; Hiligsmann, Serge ; Beckers, Laurent et alin International Journal of Hydrogen Energy (2010), 35 Investigations were carried out to determine the effect of the pH, the nitrogen source, iron and the dilution rate (h 1) on fermentative hydrogen production from glucose by the newly isolated strain ... [more ▼] Investigations were carried out to determine the effect of the pH, the nitrogen source, iron and the dilution rate (h 1) on fermentative hydrogen production from glucose by the newly isolated strain Citrobacter freundii CWBI952. The hydrogen production rate (HPR), hydrogen yield, biomass and soluble metabolites were monitored at 30 C in 100 mL serum bottles and in a 2.3 L bioreactor operated in batch, sequenced-batch and semicontinuous mode. The results indicate that hydrogen production activity, formate biosynthesis and glucose intake rates are very sensitive to the culture pH, and that additional formate bioconversion and production of hydrogen with lower biomass yields can be obtained at pH 5.9. In a further series of cultures casein peptone was replaced by (NH4)2SO4, a low cost alternative nitrogen source. The ammonia-based substitute was found to be suitable for H2 production when a concentration of 0.045 g/L FeSO4 was provided. Optimal overall performances (ca. an HPR of 33.2 mL H2/L h and a yield of 0:83 molH2 =molglucose) were obtained in the semicontinuous culture applying the previously optimized parameters for pH, nitrogen, and iron with a dilution rate of 0.012 h 1 and degassing of biogas by N2 at a 28 mL/min flow rate. [less ▲] Detailed reference viewed: 89 (22 ULg) Chemical communication between earthworms and soil fungiZirbes, Lara ; Thonart, Philippe ; Wathelet, Jean-Paul et alPoster (2010) Detailed reference viewed: 45 (10 ULg) Hydrolysis of starch by sorghum malt for maltodextrin productionBa, Khady ; Destain, Jacqueline ; Thonart, Philippe ![]() Poster (2009, December 16) Maltodextrin is a mixture of saccharides with a molecular weight between polysaccharides and oligosaccharides with DE lower than 20. Maltodextrin is more soluble in water than native starches, also is ... [more ▼] Maltodextrin is a mixture of saccharides with a molecular weight between polysaccharides and oligosaccharides with DE lower than 20. Maltodextrin is more soluble in water than native starches, also is cheaper in comparison with other major edible hydrocolloids. Maltodextrin is obtained by moderate enzymatic or acidic hydrolysis of starch. The hydrolysis of starch, catalyzed by amylases, is the most important commercial enzyme process. The hydrolyzed products are widely applied in food, paper and textile industries. Because of the increasing demand for these enzymes in various industries, there is enormous interest in developing enzymes with better properties, such as raw starch-degrading amylases suitable for industrial applications and their cost-effective production techniques. Sorghum (Sorghum bicolor) is a widely grown crop in Africa. Obtaining enzymes from sorghum requires a transformation. The objective of this study was application of sorghum amylase for maltodextrin. Sorghum seeds were supplied by the ISRA (Bambey, Senegal). Seeds were germinated in the laboratory at 30°C for 72 h and the sorghum malt was dried at 40°C for 48 h. Corn starch (from Roquette, France) hydrolysis was assayed in a bioreactor of 2 l at a temperature of 65°C gently stirred. Raw starch was slurried in water (30% w/v) and sorghum malt was introduced, chloride calcium was added, pH was adjusted to 6. Maltodextrin was characterized in term of the dextrose equivalent (DE) during the hydrolysis. The yield of hydrolysis was evaluated by soluble solids (° BRIX) at different hydrolysis time. The glucose concentration released was measured by DNS method (Miller method). [less ▲] Detailed reference viewed: 62 (4 ULg) Fermentative biohydrogen production by a Clostridium butyricum sp. strain in a novel continuous rotating cylinder bioreactorBeckers, Laurent ; Hiligsmann, Serge ; Hamilton, Christopher et alPoster (2009, December 16) Detailed reference viewed: 11 (4 ULg) Fermentative biohydrogen production by a Clostridium butyricum sp. strain in a novel continuous rotating cylinder bioreactorBeckers, Laurent ; Hiligsmann, Serge ; Hamilton, Christopher et alPoster (2009, December 16) Detailed reference viewed: 31 (16 ULg) Optimization of culture condition for hydrogen production by Clostridium butyricumMasset, Julien ; Hiligsmann, Serge ; Beckers, Laurent et alPoster (2009, December 16) Detailed reference viewed: 21 (8 ULg) Investigation of hydrogenase molecular markers to optimize hydrogen production from organic waste and agro-food industries effluentsHamilton, Christopher ; Calusinska, Magdalena ; Masset, Julien et alPoster (2009, December 16) Detailed reference viewed: 35 (13 ULg) Application of molecular techniques to monitor the evolution of bacterial consortia composed of Clostridium sp. in a hydrogen producing bioreactorCalusinska, Magdalena ; ; Joris, Bernard et alPoster (2009, December 11) Our current dependence on fossil fuels as the primary energy source contributes to global climate change, environmental degradation and health problems. Hydrogen offers a tremendous potential as a clean ... [more ▼] Our current dependence on fossil fuels as the primary energy source contributes to global climate change, environmental degradation and health problems. Hydrogen offers a tremendous potential as a clean, renewable energy currency and it is compatible with electrochemical and combustion processes for energy conversion without producing carbon – based emissions. Many microorganisms, especially photosynthetic as well as facultative and anaerobic bacteria have been reported to produce large amounts of hydrogen from soluble and insoluble biomass. Clostridia, being obligate anaerobes, are capable of biogas production during ‘dark fermentation’ of a wide range of carbohydrates. In this ARC project, entitled Micro – H2 we have focused on a new direction in bio – hydrogen production systems which is the use of mixed cultures of microorganisms (consortia). We expect that the combination of complementary metabolisms could significantly increase the efficiencies of mixed systems compared to monocultures. However, a few fundamental studies need to be carried out in order to investigate and improve the stability of microbial populations involved in the processes. It is now recognised that molecular microbial ecology tools provide the scientific basis to monitor the processes used in environmental biotechnology. To characterize the diversity of bacterial communities, quantitative techniques such as Real – Time Quantitative PCR and FISH (Fluorescence in situ hybridization) and semi – quantitative DGGE (Denaturing Gradient Gel Electrophoresis) have been optimized and applied on different bioreactor samples. This approach enabled for the temporal monitoring of the evolution of bacterial consortia, both in terms of species dominance and their metabolic activity. Molecular analysis of bacterial consortia allowed for careful examination of interactions between different bacterial species within a consortium, which is crucial in the stabilization of the hydrogen production process. [less ▲] Detailed reference viewed: 25 (2 ULg) Rapport de recherche (mission du 1er mars 2008 au 6 novembre 2009): Valorisation par la volaille des hydrates de carbone de structure issus des industries agro-alimentaires: effets des enzymes fibrolytiques ruminalesHissette, Mathias ; Thewis, André ; Thonart, Philippe et alReport (2009) Detailed reference viewed: 5 (1 ULg) le développement de starters lactiques : de la cellule au produit finiThonart, Philippe ; ; et alConference (2009, November 02) Detailed reference viewed: 20 (8 ULg) Le développement de starters lactiques : de la cellule au produit fini.Thonart, Philippe ; ; et alConference (2009, November) Detailed reference viewed: 20 (4 ULg) Evaluation of a set of E.coli reporter strains as a physiological tracer for the monitoring of the bioreactor hydrodynamic efficiencyDelvigne, Frank ; ; Thonart, Philippe ![]() Conference (2009, October 14) Detailed reference viewed: 3 (3 ULg) |
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