References of "Soyeurt, Hélène"
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See detailPotentiel d'utilisation de la spectrometrie moyen infrarouge pour prédire le rendement fromager du lait et étudier sa variabilité génétique
Colinet, Frédéric ULg; Troch, Thibault ULg; Abbas, O. et al

in 20èmes Rencontres Recherches Ruminants, Paris, les 4 et 5 Décembre 2013 (2013, December)

Fournir une indication rapide, fiable et bon marché du rendement fromager pour un lait donné, sans devoir appliquer des formules (empiriques ou théoriques) à partir des concentrations préalablement ... [more ▼]

Fournir une indication rapide, fiable et bon marché du rendement fromager pour un lait donné, sans devoir appliquer des formules (empiriques ou théoriques) à partir des concentrations préalablement déterminées pour différents constituants du lait, serait un outil utile et économiquement intéressant tant pour les éleveurs que pour l’industrie laitière. En vue d’étudier la variabilité génétique du rendement fromager à l’échelle du cheptel bovin wallon, des méthodes chimiométriques ont été utilisées afin de développer des équations de prédictions basées sur des spectres moyen infrarouge (MIR) pour les rendements fromagers déterminés en laboratoire et exprimés en frais (RdFF) ou en sec (RdFS). Ceux-ci ont été déterminés sur 258 échantillons de lait analysés en spectrométrie MIR. Les équations de prédiction à partir du spectre MIR du lait ont été développées en utilisant la régression des moindres carrés partiels (PLS) avec une validation croisée interne appliquée sur la dérivée première des spectres MIR. Les coefficients de détermination de validation croisée (R²cv) des équations étaient de 0,81 pour les prédictions du RdFF et de 0,82 pour les celles du RdFS. Les rapports des performances sur les variabilités (RPD) étaient égaux à 2,3. Ces résultats peuvent permettre d’envisager une bonne utilité pratique pour leur prédiction respective, notamment dans le cadre de recherches génétiques. Ces équations ont été appliquées sur la base de données spectrales générée dans le cadre du contrôle laitier wallon. Les composantes de la variance ont été estimées séparément pour le RdFF et le RdFS basées sur un modèle animal « contrôles élémentaires » utilisant des régressions aléatoires. Le jeu de données utilisé comportait 51 537 prédictions pour 7 870 vaches primipares Holstein. Les héritabilités journalières moyennes variaient entre 0,31 (au 5ème jour de lactation (JDL)) et 0,59 (au 279ème JDL) pour le RdFF et entre 0,31 (au 5ème JDL) et 0,57 (au 299ème JDL) pour le RdFS. Ces héritabilités journalières modérées à élevées ont indiqué le potentiel de sélection génétique pour ces deux caractères. [less ▲]

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See detailMid-infrared prediction of cheese yield from milk and its genetic variability in first-parity cows
Colinet, Frédéric ULg; Troch, Thibault ULg; Vanden, Bossche et al

Conference (2013, August 29)

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See detailGenetic effects of heat stress on milk yield and MIR predicted methane emissions of Holstein cows
Vanrobays, Marie-Laure ULg; Gengler, Nicolas ULg; Kandel, Purna Bhadra ULg et al

Conference (2013, August 28)

Dairy cows both contribute to and are affected by climate change. Breeding for heat tolerance and reduced methane (CH4) emissions is a key requirement to mitigate interactions between dairy cows and ... [more ▼]

Dairy cows both contribute to and are affected by climate change. Breeding for heat tolerance and reduced methane (CH4) emissions is a key requirement to mitigate interactions between dairy cows and climate change. This study was aimed to estimate genetic variation of milk yield and CH4 emissions over the whole trajectory of temperature humidity index (THI) using a reaction norm approach. A total of 257,635 milk test-day (TD) records and milk mid-infrared (MIR) spectra from 51,782 Holstein cows were used. Data were collected between January 2007 and December 2010 in 983 herds by the Walloon Breeding Association (Ciney, Belgium). The calibration equation developed by Vanlierde et al. (Abstract submitted to EAAP 2013; R² of cross-validation=0.70) was applied on the spectral data in order to predict CH4 emissions values (g CH4/d). These values were divided by fat and protein corrected milk yield (FPCM) defining a new CH4 trait (g CH4/kg of FPCM). Daily THI values were calculated using the mean of daily values of dry bulb temperature and relative humidity from meteorological data. Mean daily THI of the previous 3 days before each TD record was used as the THI of reference for that TD. Bivariate (milk yield and a CH4 trait) random regression TD mixed models with random linear regressions on THI values were used. Estimated average daily heritability for milk yield was 0.17 and decreased slightly at extreme THI values. However, heritabilities of MIR CH4 traits increased as THI values increase: from 0.10 (THI=28) to 0.14 (THI=75) for MIR CH4 (g/d) and from 0.14 (THI=28) to 0.21 (THI=75) for MIR CH4 (g/kg of FCPM). Genetic correlations between milk yield and MIR CH4 (g/d) ranged from -0.09 (THI=28) to -0.12 (THI=75) and those between milk yield and MIR CH4 (g/kg of FPCM) from -0.75 (THI=28) to -0.71 (THI=75). These results showed that milk production and CH4 emissions of dairy cows seemed to be influenced by THI. [less ▲]

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See detailHerd-test-day variability of methane emissions predicted from milk MIR spectra in Holstein cows
Vanrobays, Marie-Laure ULg; Kandel, Purna Bhadra ULg; Soyeurt, Hélène ULg et al

Poster (2013, August 26)

The aim of this study was to estimate the herd-test-day (HTD) effect on milk yield, fat and protein content, and methane (CH4) emissions of Walloon Holstein first-parity cows. A total of 412,520 test-day ... [more ▼]

The aim of this study was to estimate the herd-test-day (HTD) effect on milk yield, fat and protein content, and methane (CH4) emissions of Walloon Holstein first-parity cows. A total of 412,520 test-day records and milk mid-infrared (MIR) spectra of 69,223 cows in 1,104 herds were included in the data set. The prediction equation developed by Vanlierde et al. (Abstract submitted to EAAP 2013; R² of cross-validation=0.70) was applied on the recorded spectral data to predict CH4 emissions (g/d). Daily CH4 emissions expressed in g/kg of milk were computed by dividing CH4 emissions (g/d) by daily milk yield of cows. Several bivariate (a CH4 trait with a production trait) random regression test-day models including HTD and classes of days in milk and age at calving as fixed effects and permanent environment and genetic as random effects were used. HTD solutions of studied traits obtained from these models were studied and presented large deviations (CV=17.54%, 8.93%, 4.68%, 15.51%, and 23.18% for milk yield, fat and protein content, MIR CH4 (g/d), and MIR CH4 (g/kg of milk), respectively) indicating differences among herds, especially for milk yield and CH4 traits. HTD means per month of milk yield and fat and protein contents presented similar patterns within year. The maximum of monthly HTD means corresponded to the spring (pastern release) for milk yield and to the winter for fat and protein contents. The minimum corresponded to the month of November for milk yield and to the summer for the other traits. For MIR CH4 (g/d), monthly HTD means showed similar patterns as fat and protein content within year. MIR CH4 (g/kg of milk) presented maximum values of monthly HTD means in November and minimum values in May. Finally, results of this study showed that HTD effects on milk production traits and on MIR CH4 emissions varied through herds and seasons. [less ▲]

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See detailHerd-test-day variability of methane emissions predicted from milk MIR spectra in Holstein cows
Vanrobays, Marie-Laure ULg; Kandel, Purna Bhadra ULg; Soyeurt, Hélène ULg et al

in Book of Abstracts of the 64th Annual Meeting of the European Federation of Animal Science (2013, August)

The aim of this study was to estimate the herd-test-day (HTD) effect on milk yield, fat and protein content, and methane (CH4) emissions of Walloon Holstein first-parity cows. A total of 412,520 test-day ... [more ▼]

The aim of this study was to estimate the herd-test-day (HTD) effect on milk yield, fat and protein content, and methane (CH4) emissions of Walloon Holstein first-parity cows. A total of 412,520 test-day records and milk mid-infrared (MIR) spectra of 69,223 cows in 1,104 herds were included in the data set. The prediction equation developed by Vanlierde et al. (Abstract submitted to EAAP 2013; R² of cross-validation=0.70) was applied on the recorded spectral data to predict CH4 emissions (g/d). Daily CH4 emissions expressed in g/kg of milk were computed by dividing CH4 emissions (g/d) by daily milk yield of cows. Several bivariate (a CH4 trait with a production trait) random regression test-day models including HTD and classes of days in milk and age at calving as fixed effects and permanent environment and genetic as random effects were used. HTD solutions of studied traits obtained from these models were studied and presented large deviations (CV=17.54%, 8.93%, 4.68%, 15.51%, and 23.18% for milk yield, fat and protein content, MIR CH4 (g/d), and MIR CH4 (g/kg of milk), respectively) indicating differences among herds, especially for milk yield and CH4 traits. HTD means per month of milk yield and fat and protein contents presented similar patterns within year. The maximum of monthly HTD means corresponded to the spring (pastern release) for milk yield and to the winter for fat and protein contents. The minimum corresponded to the month of November for milk yield and to the summer for the other traits. For MIR CH4 (g/d), monthly HTD means showed similar patterns as fat and protein content within year. MIR CH4 (g/kg of milk) presented maximum values of monthly HTD means in November and minimum values in May. Finally, results of this study showed that HTD effects on milk production traits and on MIR CH4 emissions varied through herds and seasons. [less ▲]

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See detailMid-infrared prediction of cheese yield from milk and its genetic variability in first-parity cows
Colinet, Frédéric ULg; Troch, Thibault ULg; Vanden Bossche, Sandrine et al

in Book of Abstracts of the 64th Annual Meeting of the European Federation of Animal Science (2013, August)

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See detailGenetic effects of heat stress on milk yield and MIR predicted methane emissions of Holstein cows
Vanrobays, Marie-Laure ULg; Gengler, Nicolas ULg; Kandel, Purna Bhadra ULg et al

in Book of Abstracts of the 64th Annual Meeting of the European Federation of Animal Science (2013, August)

Dairy cows both contribute to and are affected by climate change. Breeding for heat tolerance and reduced methane (CH4) emissions is a key requirement to mitigate interactions between dairy cows and ... [more ▼]

Dairy cows both contribute to and are affected by climate change. Breeding for heat tolerance and reduced methane (CH4) emissions is a key requirement to mitigate interactions between dairy cows and climate change. This study was aimed to estimate genetic variation of milk yield and CH4 emissions over the whole trajectory of temperature humidity index (THI) using a reaction norm approach. A total of 257,635 milk test-day (TD) records and milk mid-infrared (MIR) spectra from 51,782 Holstein cows were used. Data were collected between January 2007 and December 2010 in 983 herds by the Walloon Breeding Association (Ciney, Belgium). The calibration equation developed by Vanlierde et al. (Abstract submitted to EAAP 2013; R² of cross-validation=0.70) was applied on the spectral data in order to predict CH4 emissions values (g CH4/d). These values were divided by fat and protein corrected milk yield (FPCM) defining a new CH4 trait (g CH4/kg of FPCM). Daily THI values were calculated using the mean of daily values of dry bulb temperature and relative humidity from meteorological data. Mean daily THI of the previous 3 days before each TD record was used as the THI of reference for that TD. Bivariate (milk yield and a CH4 trait) random regression TD mixed models with random linear regressions on THI values were used. Estimated average daily heritability for milk yield was 0.17 and decreased slightly at extreme THI values. However, heritabilities of MIR CH4 traits increased as THI values increase: from 0.10 (THI=28) to 0.14 (THI=75) for MIR CH4 (g/d) and from 0.14 (THI=28) to 0.21 (THI=75) for MIR CH4 (g/kg of FCPM). Genetic correlations between milk yield and MIR CH4 (g/d) ranged from -0.09 (THI=28) to -0.12 (THI=75) and those between milk yield and MIR CH4 (g/kg of FPCM) from -0.75 (THI=28) to -0.71 (THI=75). These results showed that milk production and CH4 emissions of dairy cows seemed to be influenced by THI. [less ▲]

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See detailPhenotypic and genetic variability of methane emissions and milk fatty acid contents of Walloon Holstein dairy cows
Vanrobays, Marie-Laure ULg; Kandel, Purna Bhadra ULg; Soyeurt, Hélène ULg et al

Poster (2013, February 07)

There is a growing interest in reducing methane (CH4) emissions from enteric fermentation of dairy cows because these emissions contribute to climate change and represent losses of gross energy intake for ... [more ▼]

There is a growing interest in reducing methane (CH4) emissions from enteric fermentation of dairy cows because these emissions contribute to climate change and represent losses of gross energy intake for cows. Milk fatty acid (FA) profile is influenced by rumen fermentations. The aim of this study was to estimate phenotypic and genetic variability of enteric CH4 emissions of dairy cows and FA contents of milk. CH4 emissions (g/d) and milk FA contents are predicted from milk mid-infrared (MIR) spectra based on calibration equations developed by Vanlierde et al. (2013) and Soyeurt et al. (2011), respectively. Data included 161,681 records from 22,642 cows in 489 herds. Genetic parameters of MIR CH4 emissions and 7 groups of FA contents in milk were estimated for Walloon Holstein cows in first parity using bivariate (CH4 emission with a FA trait) random regression test-day models. Saturated FA presented higher genetic correlations with MIR CH4 production than unsaturated FA (0.25 vs. 0.10). Genetic correlations with MIR CH4 emissions were higher for short-(SC) and medium-chain (MC) FA (0.24 and 0.23, respectively) than for long-chain (LC) FA (0.13). Phenotypic correlations between MIR CH4 emissions and SC and MC FA were also higher than those between MIR CH4 emissions and LC FA (0.20 vs. -0.08). Finally, results showed that MIR milk FA profile and MIR CH4 emissions are correlated emphasizing indirect link between milk FA and CH4 emissions through rumen metabolism. [less ▲]

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See detailEtude de la variabilité des aptitudes à la transformation laitière en Région wallonne basée sur l'utilisation de la spectrométrie infrarouge
Colinet, Frédéric ULg; Troch, Thibault ULg; Vanden Bossche, S. et al

in 18ième Carrefour des Productions animales : Nouvelles approches pour une optimisation de nos élevages laitiers (2013, February)

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See detailValidation of fatty acid predictions in milk using mid-infrared spectrometry across cattle breeds.
Maurice – Van Eijndhoven, Myrthe; Soyeurt, Hélène ULg; Dehareng, Frédéric et al

in Animal (2013), 7

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See detailDevelopment of a method to predict individual enteric methane emissions from cows based on milk mid-infrared spectra
Vanlierde, Amélie ULg; Froidmont, Eric; Soyeurt, Hélène ULg et al

in Hassouna, Mélynda; Guingand, Nadine (Eds.) Emissions of Gas and Dust from Livestock (2013)

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See detailGenetic parameters for methane emissions predicted from milk mid-infrared spectra in dairy cows
Kandel, Purna Bhadra ULg; Vanrobays, Marie-Laure ULg; Vanlierde, Amélie ULg et al

in Journal of Dairy Science (2013), 95(E-1), 388

Genetic selection of low methane (CH4) emitting animals is additive and permanent but the difficulties associated with individual CH4 measurement result in a paucity of records required to estimate ... [more ▼]

Genetic selection of low methane (CH4) emitting animals is additive and permanent but the difficulties associated with individual CH4 measurement result in a paucity of records required to estimate genetic variability of CH4 traits. Recently, it was shown that direct quantification of CH4 emissions by mid-infrared spectroscopy (MIR) from milk. The CH4 prediction equation was developed using 452 SF6 CH4 measurements with associated milk spectra and the calibration equation was developed using PLS regression. The obtained SD of predicted CH4 was 126.39 g/day with standard error of cross validation 68.68 g/day and a cross-validation coefficient of determination equal to 70%. The equation was applied on a total of 338,917 spectra obtained from milk samples collected between January 2007 and August 2012 during the Walloon milk recording for first parity Holstein cows. The prediction of MIR CH4 was 547 ± 111 g/d and MIR CH4 g/kg of fat and protein corrected milk (FPCM) was 23.66 ± 8.21.Multi-trait random regression test-day models were used to estimate the genetic variability of MIR predicted CH4 and milk production traits. The heritability, phenotypic and genetic correlations between MIR predicted CH4 traits and milk traits are presented in Table 1. Estimated heritability for CH4 g/day and CH4 g/kg of FPCM were lower than common production traits but would still be useful in breeding programs. While selection for cows emitting lower amounts of MIR predicted CH4 (g/d) would have little effect on milk production traits, selection on MIR predicted CH4 (g/kg of FPCM) would decrease FPCM, fat and protein yields. These genetic parameters of CH4 indicator traits might be entry point for selection that accounts mitigation of CH4 from dairy farming. Table 1. Heritability (diagonal), phenotypic (below the diagonal) and genetic (above the diagonal) correlations between MIR predicted CH4 and production traits Traits MIR CH4 (g/d) MIR CH4 ((g/kg of FPCM) FPCM Fat yield Protein yield MIR CH4 (g/d) 0.11 0.42 0.03 0.19 0.04 MIR CH4 (g/kg of FPCM)0.59 0.18 -0.83 -0.72 -0.77 FPCM -0.02 -0.65 0.20 0.95 0.91 Fat yield 0.01 -0.58 0.76 0.22 0.70 Protein yield -0.01 -0.61 0.78 0.69 0.20 [less ▲]

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See detailGenetic parameters of milk production traits and fatty acid contents in milk for Holstein cows in parity 1 – 3
Bastin, Catherine ULg; Soyeurt, Hélène ULg; Gengler, Nicolas ULg

in Journal of Animal Breeding & Genetics (2013), 130(2),

The objective of this study was to estimate genetic parameters of milk, fat, and protein yields, fat and protein contents, somatic cell count, and 17 groups and individual milk fatty acid (FA) contents ... [more ▼]

The objective of this study was to estimate genetic parameters of milk, fat, and protein yields, fat and protein contents, somatic cell count, and 17 groups and individual milk fatty acid (FA) contents predicted by mid-infrared spectrometry for first-, second- and third-parity Holstein cows. Edited data included records collected in the Walloon region of Belgium from 37 768 cows in parity 1, 22 566 cows in parity 2 and 8221 in parity 3. A total of 69 (23 traits for three parities) single-trait random regression animal test-day models were run. Approximate genetic correlations among traits were inferred from pairwise regressions among estimated breeding values of cow having observations. Heritability and genetic correlation estimates from this study reflected the origins of FA: de novo synthetized or originating from the diet and the body fat mobilization. Averaged daily heritabilities of FA contents in milk ranged between 0.18 and 0.47. Average daily genetic correlations (averaged across days in milk and parities) among groups and individual FA contents in milk ranged between 0.31 and 0.99. The genetic variability of FAs in combination with the moderate to high heritabilities indicated that FA contents in milk could be changed by genetic selection; however, desirable direction of change in these traits remains unclear and should be defined with respect to all issues of importance related to milk FA. [less ▲]

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See detailPhenotyping of robustness and milk quality
Berry, D.P.; McParland, S.; Bastin, Catherine ULg et al

in Advances in Animal Biosciences (2013), 4(3), 600-605

A phenotype describes the outcome of the interacting development between the genotype of an individual and its specific environment throughout life. Animal breeding currently exploits large data sets of ... [more ▼]

A phenotype describes the outcome of the interacting development between the genotype of an individual and its specific environment throughout life. Animal breeding currently exploits large data sets of phenotypic and pedigree information to estimate the genetic merit of animals. Here we describe rapid, low-cost phenomic tools for dairy cattle. We give particular emphasis to infrared spectroscopy of milk because the necessary spectral data are already routinely available on milk samples from individual cows and herds, and therefore the operational cost of implementing such a phenotyping strategy is minimal. The accuracy of predicting milk quality traits from mid-infrared spectroscopy (MIR) analysis of milk, although dependent on the trait under investigation, is particularly promising for differentiating between good and poor-quality dairy products. Many fatty acid concentrations in milk, and in particular saturated fatty acid content, can be very accurately predicted from milk MIR. These results have been confirmed in many international populations. Albeit from only two studied populations investigated in the RobustMilk project, milk MIR analysis also appears to be a reasonable predictor of cow energy balance, a measure of animal robustness; high accuracy of prediction was not expected as the gold standard method of measuring energy balance in those populations was likely to contain error. Because phenotypes predicted from milk MIR are available routinely from milk testing, longitudinal data analyses could be useful to identify animals of superior genetic merit for milk quality and robustness, as well as for monitoring changes in milk quality and robustness because of management, while simultaneously accounting for the genetic merit of the animals. These sources of information can be very valuable input parameters in decision-support tools for both milk producers and processors. [less ▲]

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