References of "Francis, Frédéric"
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See detailScale-down effect on the extracellular proteome of Escherichia coli: correlation with membrane permeability and modulation according substrate heterogeneities
Brognaux, Alison ULg; Francis, Frédéric ULg; Twizere, Jean-Claude ULg et al

in Bioprocess and Biosystems Engineering (2014)

Protein leakage is induced in well-mixed fed-batch bioreactor by comparison with cultures carried out in scale-down conditions. This effect is attributed to a progressive increase of cell membrane ... [more ▼]

Protein leakage is induced in well-mixed fed-batch bioreactor by comparison with cultures carried out in scale-down conditions. This effect is attributed to a progressive increase of cell membrane permeability and the synthesis of several outer-membrane components allowing to cope with substrate limitation commonly found in high-cell density culture. A comparative analysis of protein leakage has thus been performed in well-mixed bioreactors and in scale-down devices. The extracellular proteome of E.coli has been investigated by 2D-gel electrophoresis and identified by subsequent MALDI-TOF analysis. On 110 picked spots, 67 proteins have been identified and the sub-localisation and the molecular function of these proteins have been determined. A majority of the extracellular proteome was composed of outer-membrane and periplasmic proteins (64%) confirming the fact that leakage is involved in high-cell density cultures. About 50% of this extracellular proteome was composed of transport and binding proteins. Furthermore, the more abundant spots on the gel corresponded to porin proteins and periplasmic transporters. In particular, the OmpC porin was found to be very abundant. Moreover, the scale-down effect on this extracellular proteome has been investigated by 2D-DIGE analysis (2-Dimensional Differential in-Gel Electrophoresis) and significant differences have been observed by comparison with culture carried out in well-mixed systems. Indeed, since substrate limitation signal is alleviated in this kind of apparatus, cell permeability was lowered as shown by flow cytometry. In scale-down conditions, protein leakage was thus less abundant. [less ▲]

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See detailScale-down effect on the extracellular proteome of Escherichia coli: correlation with membrane permeability and modulation according substrate heterogeneities
Brognaux, Alison ULg; Francis, Frédéric ULg; Twizere, Jean-Claude ULg et al

in Bioprocess and Biosystems Engineering (2014)

Protein leakage is induced in well-mixed fed-batch bioreactor by comparison with cultures carried out in scale-down conditions. This effect is attributed to a progressive increase of cell membrane ... [more ▼]

Protein leakage is induced in well-mixed fed-batch bioreactor by comparison with cultures carried out in scale-down conditions. This effect is attributed to a progressive increase of cell membrane permeability and the synthesis of several outer-membrane components allowing to cope with substrate limitation commonly found in high-cell density culture. A comparative analysis of protein leakage has thus been performed in well-mixed bioreactors and in scale-down devices. The extracellular proteome of E.coli has been investigated by 2D-gel electrophoresis and identified by subsequent MALDI-TOF analysis. On 110 picked spots, 67 proteins have been identified and the sub-localisation and the molecular function of these proteins have been determined. A majority of the extracellular proteome was composed of outer-membrane and periplasmic proteins (64%) confirming the fact that leakage is involved in high-cell density cultures. About 50% of this extracellular proteome was composed of transport and binding proteins. Furthermore, the more abundant spots on the gel corresponded to porin proteins and periplasmic transporters. In particular, the OmpC porin was found to be very abundant. Moreover, the scale-down effect on this extracellular proteome has been investigated by 2D-DIGE analysis (2-Dimensional Differential in-Gel Electrophoresis) and significant differences have been observed by comparison with culture carried out in well-mixed systems. Indeed, since substrate limitation signal is alleviated in this kind of apparatus, cell permeability was lowered as shown by flow cytometry. In scale-down conditions, protein leakage was thus less abundant. [less ▲]

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See detailThree aspects, One concept: Agroecology. Agroecological practices and human interactions for a new approach for science. An example at the Univeristy of Liege.
Hatt, Séverin ULg; Artru, Sidonie ULg; Boeraeve, Fanny ULg et al

Poster (2014, February 07)

Critics are raising about conventional farming and its consequences on biodiversity, human health and society. As alternatives, novel models for agriculture are proposed, and among them Agroecology. Quite ... [more ▼]

Critics are raising about conventional farming and its consequences on biodiversity, human health and society. As alternatives, novel models for agriculture are proposed, and among them Agroecology. Quite often, Agroecology is seen as the application of ecological knowledge to the agricultural production. Indeed, this helps to develop more ecological farming practices favoring biodiversity to provide ecosystem services at multiple scales. Agroecology goes further in considering that the agricultural production is integrated in a food system guided by human interactions. This latter one takes into account socio-economic and political dimensions to develop new production systems. Doing so, it assures food security worldwide while preserving resources for future generations. Facing these ambitious objectives, academics are invited to elaborate a new approach for science in developing participatory and action-oriented approaches as well as multidisciplinarity. AgricultureIsLife is a research platform built up at the University of Liège (ULg). In 2013, 40 researchers (including 18 young researchers) from 16 research units of ULg were working in a multidisciplinary approach. About twenty research topics have been divided in four research axes of which objectives are to develop a more sustainable agriculture. The platform has the ambition to discuss its results to a large comity gathering the actors of the agricultural development. The aim of our work is firstly to present Agrocology as a concept made of three interrelated aspects. To illustrate it, the organization and objectives of the research platform AgricultureIsLife will be discussed in a second part. [less ▲]

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See detailPhysico-chemical properties and aroma profile of Acacia Honey produced in Romania
Madas, Mariana-Niculina ULg; Francis, Frédéric ULg; Marghitas, L.A. et al

in Communications in Agricultural and Applied Biological Sciences (2014, February 07), 79(1), 133-135

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See detailBiodiversity and ecosystem services: think functional!
Uyttenbroeck, Roel ULg; Hatt, Séverin ULg; Paul, Aman ULg et al

Poster (2014, February 07)

During the last years, several studies and reviews have considered the relation between biodiversity and ecosystem functioning or the provision of ecosystem services. Many studies found that plant ... [more ▼]

During the last years, several studies and reviews have considered the relation between biodiversity and ecosystem functioning or the provision of ecosystem services. Many studies found that plant functional traits and plant functional diversity (FD) are key drivers in this relation in terrestrial ecosystems. Researchers used different methods to obtain a gradient in plant FD to examine the effect on ecosystem services, going from observational studies of natural communities to synthetic assemblages. Furthermore, different methods exist to quantify plant FD going from simple functional trait richness to indices, distance-based frameworks and the division into FD components. In the AgricultureIsLife project, we set up a field experiment aiming to examine the biodiversity – ecosystem service relation in agricultural context. The experiment consists of perennial wildflower strips with different plant functional diversities in an arable field with conventional crop production. The wildflower strips were sown as synthetic assemblages but are subject to natural succession during the following years. We monitor the evolution of FD from the sowing to the establishment of a typical wildflower strip using Rhao’s quadratic entropy index to quantify FD. In addition, the flower strips will be monitored for four ecosystem services they are expected to provide: pollination, pest control, biodiversity support and provision of valuable compounds. [less ▲]

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See detailBiofilms from entomopathogenic fungi in mosquito control
Bawin, Thomas ULg; Boukraa, Slimane; Seye, Fawrou et al

Poster (2014, February 07)

Mosquitoes (Diptera: Culicidae) are zoonotic vectors of medical and veterinary importance. As part of an integrated vector control, metabolites secreted by entomopathogenic fungi could be developed as ... [more ▼]

Mosquitoes (Diptera: Culicidae) are zoonotic vectors of medical and veterinary importance. As part of an integrated vector control, metabolites secreted by entomopathogenic fungi could be developed as biopesticides. In this context, filamentous microorganisms growing on a support as biofilm in a liquid medium would offer several advantages in bioreactor regarding performances and metabolites recovery. The production of toxic metabolites by an entomopathogenic fungus Aspergillus flavus in such conditions was assessed. Three initial inoculum levels, i.e. 10^1, 10^3 and 10^6 spores/ml of PYG medium, have been tested in shake flask with or without support. Toxicity tests were performed on Culex quinquefasciatus larvae using dilutions of 1, 2, 4, 6, 8 and 10% of liquid cultures. The results indicated that A. flavus tends to form pellets in submerged culture; the size and the amount of pellets was affected by the initial inoculum level of spores. Under similar conditions, the filaments fixed on a support and didn’t appear in free form in the liquid. Toxicity tests revealed differences between both free and fixed forms. All combined conditions, LC50s ranging up to dilutions of 2.2 and 4.8% were observed within 48 hours. Secretomes could be compared between these culture conditions by proteomic and metabolomic approaches. [less ▲]

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See detailUsing micro-injection technique to assess fungal toxicity in mosquito control
Bawin, Thomas ULg; Boukraa, Slimane; Seye, Fawrou et al

in Communications in Agricultural and Applied Biological Sciences (2014, February 07), 79(1), 181-185

Topical application of insecticidal compounds allows directly exposing these substances on insect tissues and measuring their toxicity while ignoring many factors. However, this technique remains ... [more ▼]

Topical application of insecticidal compounds allows directly exposing these substances on insect tissues and measuring their toxicity while ignoring many factors. However, this technique remains difficult to apply on mosquito larvae considering their aquatic lifestyle. Micro-injection could be used for the direct deposition of toxic compounds in the larvae. Capillaries exhibiting an injection tip with an external diameter of 0.5 mm have been designed from silica tubes. For each treatment, a capillary is mounted on a pump connected to a flow rate regulator. Culex quinquefasciatus larvae were injected with 10^7 spores/ml of entomopathogenic fungi (Aspergillus clavatus, Metarhizium anisopliae, Metarhizium sp.). Mortalities were recorded daily during 72h. The distribution of spores stained with methylene blue and injected into the body of larvae was also observed according to the system described. Results showed that spores were distributed over the whole body. The injection of Aspergillus clavatus, Metarhizium anisopliae and Metarhizium sp spores induced corrected mortalities of 62%, 53% and 57% after 72h, and differed statistically from control groups. Finally, post-mortem emergences of filaments from dead larvae were observed in the case of the three fungal strains confirming spore viability. Injection of inactivated spores (or inert bodies of similar size) could help to reject the hypothesis of a response due to the presence of foreign bodies. [less ▲]

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See detailNew alternatives to chemical pesticides: deciphering the action mechanisms of lipid based plant elicitors via complementary biophysical and biological approaches.
Nasir, Mehmet Nail ULg; Polo Lozano, Damien ULg; Luzuriaga Loaiza, Walter ULg et al

Poster (2014, February)

Nowadays, many health and environmental problems are caused by the use of chemical pesticides. In this context, an increasing demand for alternative products such as biopesticides has been observed. Among ... [more ▼]

Nowadays, many health and environmental problems are caused by the use of chemical pesticides. In this context, an increasing demand for alternative products such as biopesticides has been observed. Among biopesticides, elicitor molecules which are able to trigger immune defense responses in plants are one of the most promising options. Although numerous elicitors have been discovered, the mechanisms involved in the perception, by plants, of only a few molecules have been identified. These elicitors usually interact with proteic receptors but we have recently shown that they may also act on the lipid phase of the plasma membrane. This project first aims to improve our understanding of the molecular mechanisms involved in the recognition of specific lipid based elicitors (LBE). On that basis, the FIELD project will contribute to the design and the development of innovative compounds derived natural LBE. A multi-disciplinary approach, based on chemistry, bio-physics, bio-chemistry, and phytopathology will be followed by a consortium of different research groups from Gembloux Agro-Bio Tech in close collaboration with teams from foreign institutions. [less ▲]

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See detailCombination of Genomic and Proteomic Approaches to Characterize the Symbiotic Population of the Banana Aphid (Hemiptera: Aphididae)
De Clerck, Caroline ULg; Tsuchida, Tsutomu; Massart, Sébastien ULg et al

in Environmental Entomology (2014)

Aphids are known to live in symbiosis with speciÞc bacteria called endosymbionts that have positive or negative impacts on their hosts. In this study, six banana aphid (Pentalonia nigronervosa Coquerel ... [more ▼]

Aphids are known to live in symbiosis with speciÞc bacteria called endosymbionts that have positive or negative impacts on their hosts. In this study, six banana aphid (Pentalonia nigronervosa Coquerel) strains from various geographical origins (Gabon, Madagascar, and Burundi) were screened to determine their symbiotic content, using complementary genomic (16S rDNA sequencing and speciÞc polymerase chain reaction) and proteomic (two-dimensional difference gel electrophoresis coupled with protein identiÞcation by matrix assisted laser desorption-ionization time-of-ßight mass spectrometry) approaches. Despite the geographical heterogeneity, the combined methods allowed us to identify the same two symbionts in the six aphids strains tested: Buchnera aphidicola and Wolbachia. Although B. aphidicola is found in almost all aphid species, the systematic presence of Wolbachia in banana aphids is particularly interesting, as this bacterium usually has a low prevalence in aphid species. Phylogenetic analyses showed that the Wolbachia sp. strain found in P. nigronervosa was very similar to the strain present in aphids of the genus Cinara, known to have developed a strong and long-term symbiotic association with Wolbachia. The high level of asexual reproduction in P. nigronervosa could be linked to the presence of Wolbachia, but its prevalence also suggests that this symbiotic bacterium could play a more essential role in its aphid host. [less ▲]

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See detailTechnologie de production de masse d’insectes - INSECTECH
Richard, Gaetan ULg; Hance, Thierry; Fauconnier, Marie-Laure ULg et al

Report (2014)

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See detailIsolation of an amylolytic chrysophyte, Poterioochromonas sp. from the digestive tract of the termite R. santonensis
Tarayre, Cédric ULg; Bauwens, Julien ULg; Brasseur, Catherine ULg et al

in Biotechnologie, Agronomie, Société et Environnement = Biotechnology, Agronomy, Society and Environment [=BASE] (2014), 18(1),

The aim of this work was the isolation and cultivation of amylolytic protists living in the digestive tract of the termite Reticulitermes santonensis (Feytaud). A chrysophyte identified as ... [more ▼]

The aim of this work was the isolation and cultivation of amylolytic protists living in the digestive tract of the termite Reticulitermes santonensis (Feytaud). A chrysophyte identified as Poterioochromonas sp. was isolated in a special medium containing rice grains as a source of carbon and nitrogen. Then, the protist was grown in a medium containing starch as a carbon source, tryptone, and a phosphate buffer at different pH values (5, 6 and 7). Yeast extract was added or not. Ciprofloxacin was used to avoid the bacterial development. Other antibiotics were also tested but showed an inhibitive effect on the growth of Poterioochromonas sp. Yeast extract allowed reaching 1.9 (pH 5), 2.3 (pH 6) and 2.2 (pH 7) times higher final cell concentrations, and 2.8 (pH 5), 2.8 (pH 6) and 2.2 (pH 7) times higher biomass yields. The starch concentration did not decrease in the medium until 3 and 4 days of culture, with and without yeast extract, respectively. Eight days of culture were necessary for hydrolyzing the starch completely, with and without yeast extract. Maltose and maltotriose were detected in the culture media and were hydrolyzed progressively. Maximal maltose concentrations were 0.68, 0.66 and 0.51 g.l-1 in the medium containing yeast extract. Maltotriose concentrations were only 0.17, 0.14 and 0.12 g.l-1. Other glucose oligomers were also detected but in lower quantities. It was determined that the protist developed a weak amylase activity, particularly at a weakly acidic pH (5-6). Such a pH also allowed a better growth of the protist. A maximal amylase activity of 112 nkat.l-1 was measured with yeast extract at pH 5. No other enzymatic activity (protease, cellulase or xylanase) was detected except amylase. The degradation products of starch which were obtained by enzymatic hydrolysis allow the identification of α-amylase, amyloglucosidase and possibly β-amylase activities. [less ▲]

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See detailInfestation Level Influences Oviposition Site Selection in the Tomato Leafminer Tuta absoluta (Lepidoptera: Gelechiidae)
Bawin, Thomas ULg; De Backer, Lara ULg; Dujeu, David et al

in Insects (2014), 5

The tomato leafminer, Tuta absoluta (Lepidoptera: Gelechiidae), is a devastating pest that develops principally on solanaceous plants throughout South and Central America and Europe. In this study, we ... [more ▼]

The tomato leafminer, Tuta absoluta (Lepidoptera: Gelechiidae), is a devastating pest that develops principally on solanaceous plants throughout South and Central America and Europe. In this study, we tested the influence of three levels of T. absoluta infestations on the attraction and oviposition preference of adult T. absoluta. Three infestation levels (i.e., non-infested plants, plants infested with 10 T. absoluta larvae, and plants infested with 20 T. absoluta larvae) were presented by pairs in a flying tunnel to groups of T. absoluta adults. We found no differences in terms of adult attraction for either level of infestations. However, female oviposition choice is influenced by larvae density on tomato plants. We discuss the underlying mechanisms and propose recommendations for further research [less ▲]

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See detailWhole-genome sequence of Serratia symbiotica strain CWBI-2.3T, a free-living symbiont of the Black Bean Aphid Aphis fabae
Foray, Vincent; Grigorescu, Alina ULg; Sabri, Ahmed et al

in Genome Announcements (2014), 2(4),

The gammaproteobacterium Serratia symbiotica is one of the major secondary symbionts found in aphids. Here, we report the draft genome sequence of S. symbiotica strain CWBI-2.3T, previously isolated from ... [more ▼]

The gammaproteobacterium Serratia symbiotica is one of the major secondary symbionts found in aphids. Here, we report the draft genome sequence of S. symbiotica strain CWBI-2.3T, previously isolated from the black bean aphid Aphis fabae. The 3.58-Mb genome sequence might provide new insights to understand the evolution of insect-microbe symbiosis. [less ▲]

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See detailVOC emissions and protein expression mediated by the interactions between herbivorous insects and Arabidopsis plant. A review
Hien, Truong Thi Dieu ULg; Heuskin, Stéphanie ULg; Delaplace, Pierre ULg et al

in Biotechnologie, Agronomie, Société et Environnement = Biotechnology, Agronomy, Society and Environment [=BASE] (2014), 18(3), 455-464

Herbivorous insects, such as phloem-sap feeders and chewers, induce resistance response in plants. There is a long-standing hypothesis that herbivores increase the emission of volatile organic compounds ... [more ▼]

Herbivorous insects, such as phloem-sap feeders and chewers, induce resistance response in plants. There is a long-standing hypothesis that herbivores increase the emission of volatile organic compounds (VOCs) in the Arabidopsis plant model. However, most works were restricted to the study of the regulation of plant VOC emissions and only in some cases to the effects of insects on such emissions. Often these investigations do not establish a link between quantitative and qualitative emission of plant VOCs with actual damages caused by insects. Moreover, information remain limited about the processes that occur at the protein level encoded of the host plant under stress conditions. Here, we briefly summarize the effects of specific chewing and phloem-sap feeding insects on the emission of VOCs by Arabidopsis thaliana Col-0, and review some predictions about pathogenesis-related proteins, based on current evolutionary hypotheses. Further investigation of the effects of herbivorous insects on VOC emissions and protein expression is expected to improve our knowledge about their patterns and functions in plant responses to stresses. [less ▲]

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See detailStudy of the potentiality of insect breeding system for human food in Cambodia (Ratanakiri province)
Caparros Megido, Rudy ULg; Alabi, Taofic ULg; Nieus, Clément et al

Conference (2014)

The main purpose of this work was to optimize a cheap cricket breeding production for local farmers based on unused wild resources. Cricket development (Teleogryllus testaceus (Walker)) was compared ... [more ▼]

The main purpose of this work was to optimize a cheap cricket breeding production for local farmers based on unused wild resources. Cricket development (Teleogryllus testaceus (Walker)) was compared according to seven diets composed of different ratio of aerial parts of taro, young cassava leaves, young cashew leaves, brown rice flour (with or without banana slices) and between the traditionally used chicken feed diet. Cricket mortality was low on all diets (<10 %) excepted on the two cashew-based diets (>90 %). Mean adult body mass was significantly higher on chicken feed diet and on the two cassava-based diet than on the other. Moreover, protein percentage in cassava-feed crickets was similar with this of wild crickets. As each villager grows cassava for their tubers without using the leaves, this free available resource could be used to rear crickets in order to contribute to the reduction of protein deficiency and create new source of incomes for local farmers. [less ▲]

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See detailConsumer acceptance of insect-based products
Caparros Megido, Rudy ULg; Gierts, Chloé; Blecker, Christophe ULg et al

Conference (2014)

In this study, sociocultural and food formulation aspects related to edible insects were investigated on Belgian consumers. Hedonic tests were realized to assess the acceptability of insect-based burgers ... [more ▼]

In this study, sociocultural and food formulation aspects related to edible insects were investigated on Belgian consumers. Hedonic tests were realized to assess the acceptability of insect-based burgers and insect-based breads. In the first experiment, four burgers (beef, lentil, beef/insect and lentil/insect) were presented to the participants. In the second experiment, entire mealworms, mealworm bread and mealworm crepes were presented to the participants. No difference of appreciations was noticed between a beef and a beef/insect burger and between a lentil and a lentil/insect burger. Crepes made of mealworm flour were slightly preferred in comparison with mealworm bread and entire mealworms. These results confirm that shape and appearance but also popularization and information spreading are key conditions in the acceptation of insect products in western countries and that insects will preferentially be consumed, in the future, if they are presented in an invisible way and associated with familiar flavors. [less ▲]

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See detailAphid honeydew: An arrestant and a contact kairomone for Episyrphus balteatus (Diptera: Syrphidae) larvae and adults
Leroy, Pascal; Almohamad, Raki; Attia, Sabrine et al

in European Journal of Entomology (2014), 111(2), 237-242

Predator searching efficiency increases in response to a variety of environmental cues associated with its prey. The sugary excretion of aphids (honeydew) has been found to act as a prey-associated cue ... [more ▼]

Predator searching efficiency increases in response to a variety of environmental cues associated with its prey. The sugary excretion of aphids (honeydew) has been found to act as a prey-associated cue for many aphid natural enemies. In the present study, the honeydew excreted by Acyrthosiphon pisum (Harris) was identified as an arrestant and a contact kairomone for young larvae and adults of a common predatory hoverfly, Episyrphus balteatus (De Geer) (Diptera: Syrphidae). First and second instar larvae increased their foraging behaviour in the honeydew-treated area. When plants were sprayed with crude honeydew, the speed of movement of female E. balteatus was significantly higher than in controls, resulting in a longer period of time spent on treated plants and laying eggs. We conclude that the honeydew excreted by A. pisum induces searching behaviour and acts as and arrestant not only for adults but also for young E. balteatus larvae. [less ▲]

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See detailRole of larval host plant experience and solanaceous plant volatile emissions in Tuta absoluta (Lepidoptera: Gelechiidae) host finding behavior
Caparros Megido, Rudy ULg; De Backer, Lara; Ettaïb, Refki et al

in Arthropod-Plant Interactions (2014)

The tomato leafminer, Tuta absoluta (Lepi- doptera: Gelechiidae), is considered to be a major pest that damages tomato (Solanum lycopersicum L; Solanaceae) crops in South American, European, and ... [more ▼]

The tomato leafminer, Tuta absoluta (Lepi- doptera: Gelechiidae), is considered to be a major pest that damages tomato (Solanum lycopersicum L; Solanaceae) crops in South American, European, and Mediterranean countries. This insect species is polyphagous (i.e., feeds on many types of food); hence, it could also develop on other cultivated host plants, principally solanaceous plants, such as potato (S. tuberosum L.; Solanaceae) and eggplant (S. melongena L.; Solanaceae). Therefore, we tested the hypothesis that host plant choice by adult T. absoluta is influenced by plant volatile organic compounds and larval host plant experience. One tomato cultivar (cv.) ‘Money- maker’ and three potato cv. ‘Charlotte’ ‘Bintje,’ and ‘Nicola’ were tested. Using a flying tunnel, we observed that females reared on tomato preferred flying toward tomato and, to a lesser extent, potato cv. ‘Charlotte.’ These preferences might be explained by the high release of terpenes by these two plants. When conducting oviposition choice assays, we found no preference between tomato and potato in the number of eggs laid by females that had been previously reared on either host plant. This study indicates that the host finding behavior of T. absoluta is mediated by solanaceous volatiles, while oviposition behavior appears to depend on additional stimuli. These results provide baseline information for use in the development of new control strategies against T. absoluta using semiochemicals and plant breeding. [less ▲]

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