Pathogenicity and thermotolerance of entomopathogenic fungi for the control of the scab mite, Psoroptes ovis.Lekimme, Mireille ; Focant, Charles ; Farnir, Frédéric et alin Experimental & Applied Acarology (2008), 46(1-4), 95-104 Psoroptes ovis is responsible for a highly contagious skin condition, both in sheep and cattle. This parasite has a marked economical impact in the sheep and cattle industry. Biological control is ... [more ▼] Psoroptes ovis is responsible for a highly contagious skin condition, both in sheep and cattle. This parasite has a marked economical impact in the sheep and cattle industry. Biological control is considered as a realistic alternative to chemotherapeutic control. Laboratory experiments were carried out to evaluate the pathogenicity and the thermotolerance of twelve isolates of entomopathogenic fungi from four genera (Beauveria Vuillemin, Metarhizium Sorokin, Paecilomyces Bainier and Verticillium Nees). The pathogenicity was evaluated by the survival of P. ovis females after exposure to 10(6) to 10(8) conidia ml(-1) in humidity chambers. Results revealed intra- and interspecies differences. All isolates with the exception of B. bassiana IHEM3558 and V. lecanii MUCL8672 induced 50% mortality within 2 days at the highest concentration. At this concentration the entire mite population became infected with all isolates but B. bassiana IHEM3558; however, only four isolates gave rise to 100% infected cadavers at the lowest concentration. The thermotolerance of each isolate was evaluated by measuring its growth on an artificial medium kept between 25 and 37.5 degrees C. All isolates were able to grow up to 30 degrees C but only two, M. anisopliae IHEM18027 and Paecilomyces farinosus MUCL18885, tolerated temperatures up to 35 degrees C. These two isolates could be considered as good candidates for further use as biopesticide taking into account their virulence and thermotolerance. Other critical factors linked with the implementation of this type of biocontrol in P. ovis infected animals are discussed. [less ▲] Detailed reference viewed: 36 (2 ULg) Equine third metacarpal bone properties as evaluated by axial transmission quantitative ultrasound and quantitative computed tomography; Farnir, Frédéric ; et alPoster (2008) Detailed reference viewed: 24 (6 ULg) Large-scale haplotype reconstruction using pedigree information and a Hidden Markov ModelDruet, Tom ; Coppieters, Wouter ; Farnir, Frédéric et alPoster (2008) Detailed reference viewed: 11 (0 ULg) L'évaluation quantitative du risque microbiologique: revue de trois modèles liés à Salmonella dans les aliments.Delhalle, Laurent ; Saegerman, Claude ; Farnir, Frédéric et alin Annales de Médecine Vétérinaire (2008), 152 Following international agreements and european legislation, risk analysis has become a systematic approach to control the food chain safety. The microbial risks in the food chain and their consequences ... [more ▼] Following international agreements and european legislation, risk analysis has become a systematic approach to control the food chain safety. The microbial risks in the food chain and their consequences for public health can be assessed and managed more effectively. This paper gives a general description of the risk analysis principles based on the Codex Alimentarius commission. This work highlights the advantages and disadvantages of risk analysis and also treats the problems to achieve a complete “farm to fork” model. Salmonella in different food types is taken as an example to illustrate quantitative risk assessment. Two models concerning eggs and broiler chickens developed by the World Health Organization/Food and Agriculture Organization consortium and a third model concerning pigs developed by the Veterinary Laboratories Agency of the United Kingdom are described. An analysis of the methods used for the construction of these two models is also presented. The interest of these three models is that they also include risk management options to limit the spread of food-borne infections. They also describe the final risk for a population following consumption of foodstuffs. These models are valuable tools for health officials but also for feed industry. [less ▲] Detailed reference viewed: 184 (23 ULg) Risk factors for Salmonella and hygiene indicators in the 10 largest Belgian pig slaughterhouses.Delhalle, Laurent ; ; et alin Journal of Food Protection (2008), 77 A survey was conducted to collect data on Salmonella prevalence, Escherichia coli counts (ECCs), and aerobic bacteria colony counts (ACCs) on pig carcasses after chilling at the 10 largest Belgian pig ... [more ▼] A survey was conducted to collect data on Salmonella prevalence, Escherichia coli counts (ECCs), and aerobic bacteria colony counts (ACCs) on pig carcasses after chilling at the 10 largest Belgian pig slaughterhouses during 2000 through 2004. Potential risk factors of contamination associated with production parameters, technical descriptions of the installations, and cleaning and disinfection methods were assessed during investigations in the slaughterhouses. These variables were used first in a univariate analysis and then were extended to a multivariate analysis with a logistic mixed regression model for Salmonella and a linear mixed model for ECCs and ACCs with slaughterhouses as the random effect. The results indicated high variability concerning Salmonella contamination among the 10 slaughterhouses, with prevalence ranging from 2.6 to 34.3% according to the area of origin. The median ECC and median ACC ranged from 0.43 to 1.11 log CFU/cm2 and from 2.37 to 3.65 log CFU/cm2, respectively. The results of the logistic and linear regressions revealed that some working practices such as scalding with steam, second flaming after polishing, and complete cleaning and disinfection of the splitting machine several times a day were beneficial for reducing Salmonella prevalence, ECCs, and ACCs. Changing the carcass hooks just before chilling, using water as the cleaning method, and a higher frequency of disinfection of the lairage seemed to be protective against E. coli in the multivariate mixed linear model. The monitoring of critical points, slaughterhouse equipment, good slaughtering practices, and effective washing and disinfection are the keys to obtaining good microbiological results. [less ▲] Detailed reference viewed: 72 (13 ULg) Modifications urodynamiques et morphologiques sur les portions basses du tractus urogénital après administration d'oestriol seul ou en combinaison avec la PPA chez des chiennes entières et stériliséesHamaide, Annick ; ; Farnir, Frédéric et alin Proceedings du congrès AFVAC (2007, December) Detailed reference viewed: 8 (0 ULg) Développement d’un outil pour la modélisation de la contamination de la viande de porc à l’abattoir par Salmonella.Delhalle, Laurent ; Farnir, Frédéric ; Daube, Georges ![]() Poster (2007, June) Detailed reference viewed: 10 (0 ULg) The TNF/ADAM 17 system: implication of an ADAM 17 haplotype in the clinical response to infliximab in Crohn's diseaseDideberg, Vinciane ; Theatre, Emilie ; Farnir, Frédéric et alin European Journal of Clinical Investigation (2007, May), 37(Suppl. 1), 79 Detailed reference viewed: 38 (5 ULg) Exploring the risk factors for Salmonella in the ten biggest Belgian pig slaughterhouses.Delhalle, Laurent ; ; et alPoster (2007, May) Detailed reference viewed: 5 (0 ULg) Novel Crohn disease locus identified by genome-wide association maps to a gene desert on 5p13.1 and modulates expression of PTGER4.Libioulle, Cécile ; Louis, Edouard ; Hansoul, Sarah et alin PLoS Genetics (2007), 3(4), 538-543 To identify novel susceptibility loci for Crohn disease (CD), we undertook a genome-wide association study with more than 300,000 SNPs characterized in 547 patients and 928 controls. We found three ... [more ▼] To identify novel susceptibility loci for Crohn disease (CD), we undertook a genome-wide association study with more than 300,000 SNPs characterized in 547 patients and 928 controls. We found three chromosome regions that provided evidence of disease association with p-values between 10(-6) and 10(-9). Two of these (IL23R on Chromosome 1 and CARD15 on Chromosome 16) correspond to genes previously reported to be associated with CD. In addition, a 250-kb region of Chromosome 5p13.1 was found to contain multiple markers with strongly suggestive evidence of disease association (including four markers with p < 10(-7)). We replicated the results for 5p13.1 by studying 1,266 additional CD patients, 559 additional controls, and 428 trios. Significant evidence of association (p < 4 x 10(-4)) was found in case/control comparisons with the replication data, while associated alleles were over-transmitted to affected offspring (p < 0.05), thus confirming that the 5p13.1 locus contributes to CD susceptibility. The CD-associated 250-kb region was saturated with 111 SNP markers. Haplotype analysis supports a complex locus architecture with multiple variants contributing to disease susceptibility. The novel 5p13.1 CD locus is contained within a 1.25-Mb gene desert. We present evidence that disease-associated alleles correlate with quantitative expression levels of the prostaglandin receptor EP4, PTGER4, the gene that resides closest to the associated region. Our results identify a major new susceptibility locus for CD, and suggest that genetic variants associated with disease risk at this locus could modulate cis-acting regulatory elements of PTGER4. [less ▲] Detailed reference viewed: 92 (9 ULg) Biochemical bone markers in Ardenner horses: comparison between sound horses and horses with juvenile form of interphalangeal joint disease; Lejeune, Jean-Philippe ; et alin Hippos 2007 (2007) Detailed reference viewed: 19 (0 ULg) Morphometric study of interphalangeal joints in Ardenner horses with juvenile osteoarthropathyGabriel, Annick ; Spelmans, Céline ; Farnir, Frédéric et alin Slovenian Veterinary Research (2007), 44 Detailed reference viewed: 42 (6 ULg) Evaluation of serum osteocalcin and CTX-I in Ardenner horses with special reference to juvenile interphalangeal joint disease.; ; Lejeune, Jean-Luc et alin Journal of Veterinary Medicine. A, Physiology, Pathology, Clinical Medicine (2007), 54(9), 458-63 The first aim of this study was to establish a profile of age-related normal serum concentrations of osteocalcin (OC) in Ardenner horses. For this first part, blood samples from 49 healthy Ardenner horses ... [more ▼] The first aim of this study was to establish a profile of age-related normal serum concentrations of osteocalcin (OC) in Ardenner horses. For this first part, blood samples from 49 healthy Ardenner horses were collected. The second aim was to study two biochemical markers of bone metabolism, OC and a carboxy-terminal cross-linking telopeptide of type I collagen (CTX-I), in 30 young Ardenner horses during 1 year. Amongst them, 17 showed lesions of juvenile degenerative joint disease in the distal forelimbs. A specific radioimmunoassay for equine OC was used to measure the serum concentration of the marker. The serum concentration of CTX-I was measured using a commercially available human assay validated for use in the horse. The effect of age, sex, season and health status (with or without lesions) was assessed. Levels of OC fall between birth and the adult stage: this decrease being most marked between birth and 1 year of age. This age-related decrease of OC was confirmed in the 30 young Ardenner horses, but CTX-I levels remained constant in this group. The Levels of the two markers changed significantly with the season with higher concentrations during the winter. No significant difference was shown either between the two sexes or between the two health statuses. [less ▲] Detailed reference viewed: 22 (7 ULg) Evaluation of a Fine-mapping Method Exploiting Linkage Disequilibrium in Livestock Populations: Simulation Study; Farnir, Frédéric ![]() in Asian-Australian Journal of Animal Science (2006), 19(12), 1702 Detailed reference viewed: 1 (0 ULg) The Tnf/Adam 17 System: Implication of an Adam 17 Haplotype in the Clinical Response to Infliximab in Crohn's DiseaseDideberg, Vinciane ; Theatre, Emilie ; Farnir, Frédéric et alin Pharmacogenetics and Genomics (2006), 16(10), 727-734 Infliximab, a chimeric anti-tumour necrosis factor (TNF)-alpha antibody induces a clinical response in 70% of Crohn's disease patients and the response to infliximab therapy could be partially determined ... [more ▼] Infliximab, a chimeric anti-tumour necrosis factor (TNF)-alpha antibody induces a clinical response in 70% of Crohn's disease patients and the response to infliximab therapy could be partially determined by genetic factors. The implication of both transmembrane and soluble forms of the TNF-alpha in the mechanism of action of infliximab has been demonstrated. The aim of our work was first to perform a complete study of TNF variants role in the response to infliximab in Crohn's disease. Secondly, considering the role of ADAM 17 in TNF-alpha shedding, the ADAM 17 locus was also studied. The response to infliximab was evaluated in 222 Caucasian Crohn's disease patients with a luminal (n=160) or fistulizing (n=62) form of the disease. Clinical and biological response evaluation was based on the Crohn's Disease Activity Index score and C-reactive protein level evolutions, respectively. The entire TNF gene was sequenced on the complete cohort. Twelve single nucleotide polymorphisms spanning the ADAM 17 locus were studied and haplotypes rebuilt. A clinical response was observed in 64% of the patients and biological response in 77.1% of patients. No association was found between the TNF gene and the response to infliximab. One haplotype in the ADAM 17 region was associated with a clinical response to infliximab in CD patients (adjusted P=0.045). In conclusion, our results exclude, with a reasonable power, an implication of the TNF gene in the response to infliximab in Crohn's disease, but reveal a potential role of the ADAM 17 gene in this response. [less ▲] Detailed reference viewed: 25 (1 ULg) Development of a tool for Salmonella pork meat contamination modelling in Belgium.Delhalle, Laurent ; Farnir, Frédéric ; Daube, Georges ![]() Poster (2006, September) Detailed reference viewed: 4 (0 ULg) Intraspecific bovine herpesvirus 1 recombinants carrying glycoprotein E deletion as a vaccine marker are virulent in cattleMuylkens, Benoît ; ; et alin Journal of General Virology (2006), 87(Pt 8), 2149-2154 Vaccines used in control programmes of Bovine herpesvirus 1 (BoHV-1) utilize highly attenuated BoHV-1 strains marked by a deletion of the glycoprotein E (gE) gene. Since BoHV-1 recombinants are obtained ... [more ▼] Vaccines used in control programmes of Bovine herpesvirus 1 (BoHV-1) utilize highly attenuated BoHV-1 strains marked by a deletion of the glycoprotein E (gE) gene. Since BoHV-1 recombinants are obtained at high frequency in experimentally coinfected cattle, the consequences of recombination on the virulence of gE-negative BoHV-1 were investigated. Thus, gE-negative BoHV-1 recombinants were generated in vitro from several virulent BoHV-1 and one mutant BoHV-1 deleted in the gC and gE genes. Four gE-negative recombinants were tested in the natural host. All the recombinants were more virulent than the gE-negative BoHV-1 vaccine and the gC- and gE-negative parental BoHV-1. The gE-negative recombinant isolated from a BoHV-1 field strain induced the highest severe clinical score. Latency and reactivation studies showed that three of the recombinants were reexcreted. Recombination can therefore restore virulence of gE-negative BoHV-1 by introducing the gE deletion into a different virulence background. [less ▲] Detailed reference viewed: 25 (5 ULg) Salmonella et germes indicateurs dans la filière de production et de distribution de viande de porc en Belgique.Delhalle, Laurent ; Farnir, Frédéric ; Daube, Georges ![]() Conference (2006, July) Detailed reference viewed: 12 (0 ULg) Measuring the extent of linkage disequilibrium in commercial pig populations; Farnir, Frédéric ; Davin, Fabienne et alin Animal Genetics (2006), 37(3), 225-231 To evaluate the extent of linkage disequilibrium in domestic pigs, we genotyped 33 and 44 unrelated individuals from two commercial populations for 29 and five microsatellite markers located on ... [more ▼] To evaluate the extent of linkage disequilibrium in domestic pigs, we genotyped 33 and 44 unrelated individuals from two commercial populations for 29 and five microsatellite markers located on chromosomes 15 and 2 respectively. A high proportion of marker pairs up to 40 cM apart exhibited significant linkage disequilibrium in both populations. Pair-wise r(2) values averaged between 0.15 and 0.50 (depending on chromosome and population) for markers < 1 cM apart and declined to values of 0.05 for more distant syntenic markers. Our results suggest that both populations underwent a bottleneck approximately 20 generations ago, which reduced the effective population size from thousands to < 200 animals. [less ▲] Detailed reference viewed: 5 (0 ULg) Détermination des points critiques pour la contamination par Salmonella de la viande de porc lors de la découpe, le hachage et la distribution en Belgique.Delhalle, Laurent ; Farnir, Frédéric ; Saegerman, Claude et alPoster (2006, May) Detailed reference viewed: 27 (0 ULg) |
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