References of "Du Jardin, Patrick"
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See detailInfluence of rhizobacterial volatile compounds on growth and root system architecture of Brachypodium distachyon (L.) Beauv.
Mendaluk, Magdalena ULg; Varin, Sébastien; Baudson, Caroline ULg et al

Poster (2013, February 08)

Many rhizobacterial strains are classified as plant growth-promoting rhizobacteria (PGPR) and are potentially useful to enhance plant fitness and productivity. Among the mechanisms by which PGPR improve ... [more ▼]

Many rhizobacterial strains are classified as plant growth-promoting rhizobacteria (PGPR) and are potentially useful to enhance plant fitness and productivity. Among the mechanisms by which PGPR improve plant growth, the emission of volatile organic compounds (VOCs) and their biological impacts on plants remain little documented. The aim of this work is to evaluate the growth promotion ability of 19 bacterial strains on the model grass Brachypodium distachyon Bd21 (Bd21), with a focus on this peculiar mode of interaction. A collection of 19 strains was selected for their known growth promotion potential. The impact of the rhizobacteria on the model grass was studied using an in vitro cocultivation system allowing interactions through VOCs without physical contact between plants and bacteria. The results show that the VOCs of several strains promote total biomass production, modulate biomass partitioning and affect shoot and root architecture of Bd21. The effects of the PGPR strains emitting different volatile blends were investigated via principal component analysis coupled to clustering and univariate analysis to unravel their biological effects. On the basis of volatile emissions and of their effects on plant growth, two strains have been selected in order to evaluate such interactions using an ex vitro system. The set-up of this system is in progress. [less ▲]

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See detailDevelopment of an experimental device allowing plant-plant interaction studies and in situ dynamic trapping of volatile organic compounds emitted by barley (Hordeum distichon L.) roots
Delory, Benjamin ULg; Delaplace, Pierre ULg; Fauconnier, Marie-Laure ULg et al

in Communications in Agricultural and Applied Biological Sciences (2013, February 08), 78(1), 97-102

In response to wounding or herbivore attack, leaves and roots of higher plants release volatile organic compounds (VOCs). To date, VOCs analysis and plant−plant interaction studies have been mainly ... [more ▼]

In response to wounding or herbivore attack, leaves and roots of higher plants release volatile organic compounds (VOCs). To date, VOCs analysis and plant−plant interaction studies have been mainly performed on aboveground plant tissues, leaving the roles played by root VOCs in plant−plant interaction unexplored. In this context, this project aims at setting up an original experimental device allowing both dynamic trapping of VOCs emitted by mechanically damaged H. distichon roots and the study of the roles played by root VOCs in intra and interspecific plant−plant interactions. The experimental device consists of Barley seedlings cultivated in closed PTFE reactors filled with wet sand. Before being analysed by gas chromatography−mass spectrometry, root VOCs are trapped via a dynamic system on Tenax cartridges using a charcoal-filtered and humidified air. Preliminary results show that 7 day-old wounded Barley roots emit C9 fatty acid derivatives (E-non-2-enal and nona-2,6-dienal) as major compounds, contrasting with aboveground plant tissues that mainly emit C6 alcohols, aldehydes, and their derivative esters. For plant−plant interaction studies, receiver plants are exposed to an airflow enriched with VOCs from root damaged Barley plants of the same age. [less ▲]

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See detailImplication of microRNAs in the response of Brachypodium distachyon (L.) Beauv. root system architecture to rhizobacterial volatiles
Baudson, Caroline ULg; Bouché, Frédéric ULg; Saunier de Cazenave, Magdalena ULg et al

Scientific conference (2013, February)

The metabolic roles of volatile organic compounds (VOCs) emitted by plant growth-promoting rhizobacteria (PGPR) and the identity of the molecules responsible for the growth promotion are still poorly ... [more ▼]

The metabolic roles of volatile organic compounds (VOCs) emitted by plant growth-promoting rhizobacteria (PGPR) and the identity of the molecules responsible for the growth promotion are still poorly documented. As well, the implication of microRNAs in root development is a recent discovery that deserves to be explored. In this study, the implication of microRNAs in the response of Brachypodium distachyon (L.) Beauv. Bd21 root architecture to rhizobacterial VOCs was investigated. Nineteen PGPR strains were screened to select those showing the strongest phenotypic effects. The strain Bacillus subtilis AP305-GB03 induced the most important promotion of biomass production and root development. Total RNA extraction and RT-qPCR analysis of microRNAs were performed on Bd21 root samples. The expression of miR160 a-d, miR164 f, miR167 c-d, miR397 b and miR399 a-b was measured in roots every 2 days during the first 10 days of Bd21 development, in the presence or absence of the bacterial VOCs. Differences in the expression profile of miR164 f and miR167 c-d were observed in the roots exposed to GB03 VOCs, as compared to the control. These differences could be correlated to the root system architecture modifications observed after 10 days of growth with GB03. miR397 b and miR399 a-b also showed differences in the expression profile of roots exposed to the bacterial VOCs. These microRNAs have been respectively involved in cold stress tolerance and in the response to phosphate starvation. [less ▲]

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See detailCharacterization of volatile organic compounds emitted by Barley (Hordeum vulgare L.) roots and their attractiveness to wireworms
Gfeller, Aurélie; Laloux, Morgan; Barsics, Fanny ULg et al

in Journal of Chemical Ecology (2013), 39(8), 1129-1139

Root volatile organic compounds (VOCs), their chemistry and ecological functions have garnered less attention than aboveground emitted plant VOCs. We report here for the first time on the identification ... [more ▼]

Root volatile organic compounds (VOCs), their chemistry and ecological functions have garnered less attention than aboveground emitted plant VOCs. We report here for the first time on the identification of VOCs emitted by barley roots (Hordeum vulgare L.). Twenty nine VOCs were identified from isolated 21-d-old roots. The detection of root volatiles was dependent on the medium used for root cultivation. From 7-d-old roots cultivated on sterile Hoagland gelified medium, 24 VOCs were identified, on sterile vermiculite 33 VOCs, and on non-sterile vermiculite 34 VOCs. The major VOCs identified were fatty acid derived compounds, including hexanal, methyl hexanoate, (E)-hex-2-enal, 2-pentylfuran, pentan-1-ol, (Z)-2-(pentenyl)-furan, (Z)-pent-2-en-1-ol, hexan-1-ol, (Z)-hex-3-en-1-ol, (E)-hex-2-en-1-ol, oct-1-en-3-ol, 2-ethylhexan-1-ol (likely a contaminant), (E)-non-2-enal, octan-1-ol, (2E,6Z)-nona-2,6-dienal), methyl (E)-non-2-enoate, nonan-1-ol, (Z)-non-3-en-1-ol, (E)-non-2-en-1-ol, nona-3,6-dien-1-ol and nona-2,6-dien-1-ol. In an olfactometer assay, wireworms (larvae of Agriotes sordidus Illiger, Coleoptera: Elateridae) were attracted to chemical cues emanating from barley seedlings. We discuss the role of individual root volatiles or a blend of the root volatiles detected here and their interaction with CO2for wireworm attraction. [less ▲]

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See detailImprovement of Ylang-Ylang Essential Oil Characterization by GCxGC-TOFMS
Brokl, Michal ULg; Fauconnier, Marie-Laure ULg; Benini, Céline et al

in Molecules (2013), 18(2), 1783-1797

A single fraction of essential oil can often contain hundreds of compounds. Despite of the technical improvements and the enhanced selectivity currently offered by the state-of-the-art gas chromatography ... [more ▼]

A single fraction of essential oil can often contain hundreds of compounds. Despite of the technical improvements and the enhanced selectivity currently offered by the state-of-the-art gas chromatography (GC) and mass spectrometry (MS) instruments, the complexity of essential oils is frequently underestimated. Comprehensive two-dimensional GC coupled to time-of-flight MS (GC×GC-TOFMS) was used to improve the chemical characterization of ylang-ylang essential oil fractions recently reported in a previous one-dimensional (1D) GC study. Based on both, the enhanced chromatographic separation and the mass spectral deconvolution, 161 individual compounds were identified and labeled as potentially characteristic analytes found in both low and high boiling fractions issued from distillation of mature ylang-ylang flowers. Compared to the most recent full GC-MS characterization, this represents 75 new compounds, essentially consisting of terpenes, terpenoid esters, and alcohols. [less ▲]

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See detailAllelopathic potential of Tunisian barley against weeds
Bouhaouel, Imen ULg; Gfeller, Aurélie; Fauconnier, Marie-Laure ULg et al

Poster (2012, December)

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See detailPlant growth- promoting rhizobacteria emit volatiles compounds with biostimulation activity in dicot and monocot plant species.
du Jardin, Patrick ULg; Delaplace, Pierre ULg; Varin, Sébastien et al

in Perata, Pierdomenico; Brown, Patrick; Ponchet, Michel (Eds.) Abstracts Book for Oral and Poster Presentations of the 1st World Congress on the use of Biostimulants in Agriculture (2012, November)

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See detailConservation and management of a threatened traditional agroresource, ylang-ylang Cananga odorata [Lam.] Hook f. & Thomson forma genuina, in the Indian Ocean islands
benini, céline; Mahy, Grégory ULg; jacquemin, jean-marie et al

in Crop Science (2012), 52(6), 2606-2618

In order to handle future economic, social and environmental changes, the assessment, management and conservation of the local genetic resources of cash crop species is a fundamental requirement. We ... [more ▼]

In order to handle future economic, social and environmental changes, the assessment, management and conservation of the local genetic resources of cash crop species is a fundamental requirement. We investigated the pattern of genetic and morphological diversity of Cananga odorata (Lam.) Hook f. & Thomson forma genuina, an important essential oil tree for the perfume industry in the introduction area of the western Indian Ocean islands. We sought to identify key elements for developing a conservation and management strategy for ylang-ylang genetic resources. Genetic and morphological variations were assessed using Amplified Fragments Length Polymorphism and morphometrics traits and information about farmers' practices were collected. The existence of substantial overall genetic diversity (HT = 0.2599) and the grouping of plantations into different genetic groups suggest that there have been a series of introduction events in the area, with limited exchanges of genetic material within and between islands, which is not what is suggested in the historical records. The morphological study revealed high phenotypic variability despite very similar agronomical practices throughout the studied area. The morphological and genetic variability might have been created and maintained without any planned or conscious management, and this has largely determined the genetic structuring in the area (11.74% genetic variation among islands and 20.68% among plantations). With this species, where past introduction events and farmers’ practices have shaped the genetic variation, on-farm preservation and the maintenance of the current management practices is recommended. Ex situ conservation efforts should also be undertaken, if economically affordable. [less ▲]

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See detailComparative Chemical and Molecular Variability of Cananga odorata (Lam.) Hook.f. Thomson forma genuina (Ylang-Ylang) in the Western Indian Ocean Islands: Implication for Valorization
Benini, Céline ULg; Mahy, Grégory ULg; Bizoux, Jean-Philippe ULg et al

in Chemistry & Biodiversity (2012), 9(7), 13891402

Cananga odorata (Lam.) Hook.f. Thomson forma genuina (Annonaceae) is a tropical tree, grown for the production of ylang-ylang essential oil, which is extracted from its fresh and mature flowers. Despite ... [more ▼]

Cananga odorata (Lam.) Hook.f. Thomson forma genuina (Annonaceae) is a tropical tree, grown for the production of ylang-ylang essential oil, which is extracted from its fresh and mature flowers. Despite its economic and social importance, very little information is available on its variability and the possible factors causing it. Therefore, the relationship between the genetic structure, revealed by amplified fragment length polymorphism (AFLP), and the essential oil chemical composition, determined by GC/MS analysis, of ylang-ylang grown in semi-managed systems in three Indian Ocean islands (Grande Comore, Mayotte, and Madagascar) was investigated. Our results revealed a low genetic variation within plantations and contrasted situations between islands. Variations of the chemical composition could be observed within plantations and between islands. The genetic differentiation pattern did not match the observed pattern of chemical variability. Hence, the chemical variation could not be attributed to a genetic control. As Grande Comore, Madagascar, and Mayotte present different environmental and agronomic conditions, it can be concluded that the influence of these conditions on the ylang-ylang essential oil composition is consistent with the patterns observed. Finally, several strategies were proposed to valorize the chemical composition variations. [less ▲]

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See detailRhizobacterial volatile organic compounds modulate biomass production and root architecture in Arabidopsis thaliana (L.) Heynh.
Varin, Sébastien; Saunier de Cazenave-Mendaluk, Magdalena ULg; Ormeno-Lafuente, Elena et al

Poster (2012, February 10)

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See detailPossible consequences of the overlap between the CaMV 35S promoter regions in plant transformation vectors used and the viral gene VI in transgenic plants.
Podevin, Nancy; du Jardin, Patrick ULg

in GM crops & food (2012), 3(4), 296-300

Multiple variants of the Cauliflower mosaic virus 35S promoter (P35S) are used to drive the expression of transgenes in genetically modified plants, for both research purposes and commercial applications ... [more ▼]

Multiple variants of the Cauliflower mosaic virus 35S promoter (P35S) are used to drive the expression of transgenes in genetically modified plants, for both research purposes and commercial applications. The genetic organization of the densely packed genome of this virus results in sequence overlap between P35S and viral gene VI, encoding the multifunctional P6 protein. The present paper investigates whether introduction of P35S variants by genetic transformation is likely to result in the expression of functional domains of the P6 protein and in potential impacts in transgenic plants. A bioinformatic analysis was performed to assess the safety for human and animal health of putative translation products of gene VI overlapping P35S. No relevant similarity was identified between the putative peptides and known allergens and toxins, using different databases. From a literature study it became clear that long variants of the P35S do contain an open reading frame, when expressed, might result in unintended phenotypic changes. A flowchart is proposed to evaluate possible unintended effects in plant transformants, based on the DNA sequence actually introduced and on the plant phenotype, taking into account the known effects of ectopically expressed P6 domains in model plants. [less ▲]

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See detailScaphandre La science rencontre l'art: L'art
Haubruge, Eric ULg; Bay, Daniel ULg; Semal, Jean et al

in Haubruge, Eric; Bay, Daniel; Semal, Jean (Eds.) Scaphandre La science rencontre l'art (2012)

Detailed reference viewed: 66 (15 ULg)